Xanthomonas sp. SS: HEP74_02004
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Entry
HEP74_02004 CDS
T09534
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
xas
Xanthomonas sp. SS
Pathway
xas03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HEP74_02004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xas03019
]
HEP74_02004
03009 Ribosome biogenesis [BR:
xas03009
]
HEP74_02004
Messenger RNA biogenesis [BR:
xas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HEP74_02004
Ribosome biogenesis [BR:
xas03009
]
Eukaryotic type
Pre-60S particles
RNases
HEP74_02004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QNH16869
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All DBs
Position
2469625..2470203
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AA seq
192 aa
AA seq
DB search
MAEPHVDNDRLIWIDLEMTGLDTDKDSIIEIATVVTDSQLNVLAEGPEFAIAHPLQTLQA
MDEWNRNQHRHSGLWQRVLDSKTTLGQAEAQTVSFLAQWCKPGASPMCGNSICQDRRFLH
RQMPRLERFFHYRNLDVSTLKELARRWAPSVASGLNKTSSHTALSDVHDSIDELRYYRPF
MGALSGQGNGAR
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaccgcacgtggacaacgatcgtctgatctggatcgatctggaaatgaccgga
ttggataccgacaaggattcgatcatcgagatcgccacggtggtcaccgacagccagctc
aacgtgctggccgagggcccggagttcgccatcgcgcatccgctgcagaccctgcaggcg
atggacgagtggaaccgcaaccagcatcgccattccgggctgtggcagcgcgtgctcgac
agcaagaccaccctgggccaggccgaggcgcagaccgtttcattcctggcgcagtggtgc
aagccgggtgcgtcgccgatgtgcggcaactcgatctgccaggaccggcgcttcctgcac
cggcagatgccgcggctggagcgcttcttccactaccgcaacctggacgtgtccacgctg
aaggaactggcgcggcgctgggcgccatcggtcgcctcgggactgaacaagacctcttcg
cacaccgcgctcagcgacgtgcacgactcgatcgacgagctgcgctactaccgcccgttc
atgggcgcattgagcgggcagggcaacggcgcacgctga
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