Xanthomonas sp. SS: HEP74_02185
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Entry
HEP74_02185 CDS
T09534
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
xas
Xanthomonas sp. SS
Pathway
xas02020
Two-component system
xas02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HEP74_02185 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HEP74_02185 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xas03021
]
HEP74_02185 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xas02035
]
HEP74_02185 (fliA)
Transcription machinery [BR:
xas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HEP74_02185 (fliA)
Bacterial motility proteins [BR:
xas02035
]
Flagellar system
Flagellar assembly proteins
Stator
HEP74_02185 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
UPF0147
Motif
Other DBs
NCBI-ProteinID:
QNH17044
LinkDB
All DBs
Position
2671435..2672184
Genome browser
AA seq
249 aa
AA seq
DB search
MNAAAQYRAVQRNSSNDYIAQHSDLVRRIAHHLAARLPASVEIDDLIQAGMIGLIEASRS
YDADQGASFETYASIRIRGSMIDEIRRGDWVPRSVHRRARDAASAIRKIEQSTGRAAAAN
EVAAAMDMPLPEYLRLMEDAARGQVLSLESRVEDHGELDTIAKGGPNPQQMLERSEFGRE
LGKAIALLPEREQLVLSLYYEQELNLKEIGAVLGVSESRVCQIHGQATVRLRGRLKAFEA
ADAGLEDEE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgccgcccaataccgcgccgtgcagcgcaacagctccaacgactacatcgcc
cagcattcggacctggtgcggcgcatcgcccaccacctggcggcgcgactgccggccagc
gtcgagatcgacgacctgatccaggccggcatgatcggcctgatcgaggcctcgcgcagc
tacgacgccgaccagggcgcctcgttcgagacctacgcctcgatccgcatccgcggctcg
atgatcgatgagatccgccgcggcgactgggtgccgcgttcggtgcaccgccgcgcccgc
gacgccgcctcggcgatccgcaagatcgagcagagcaccggccgcgccgccgccgccaac
gaagtggccgccgcgatggacatgccgcttcccgaatacctgcgattgatggaagatgcc
gcgcgcggccaggtgctgagcctggaatcgcgggtcgaagaccacggcgagctggacacc
atcgccaagggcgggcccaatccgcagcagatgctcgagcgcagcgagttcgggcgcgaa
ctgggcaaggcgatcgcgctgctgcccgagcgcgagcagctggtactgtctctgtactac
gaacaagaattgaacttgaaggaaatcggcgcggtgctcggtgtcagcgagtcgcgcgtc
tgccagatccacggccaggccacggtacgcttgcgcggacgcttgaaagcgttcgaagcg
gcagacgccggcctggaagacgaagaataa
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integrated database retrieval system
