Xanthomonas sp. SS: HEP74_02306
Help
Entry
HEP74_02306 CDS
T09534
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
xas
Xanthomonas sp. SS
Pathway
xas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEP74_02306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xas03019
]
HEP74_02306
Enzymes [BR:
xas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HEP74_02306
Messenger RNA biogenesis [BR:
xas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HEP74_02306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
DUF3136
DUF6448
Motif
Other DBs
NCBI-ProteinID:
QNH17164
LinkDB
All DBs
Position
complement(2827263..2828606)
Genome browser
AA seq
447 aa
AA seq
DB search
MPFTLQLIPRDQHNVSRKDISPNALRVLYRLREAGFGAYLVGGAVRDLLVELQPKDFDVA
TDATPEQVKQLFRNCRLIGRRFRLAHVVYGREIIEVATFRANVDDGSGDRELDNGRLVRD
NVYGSIEDDAVRRDFTCNALYYAIEDFSVRDYTGGFADVQARLMRMIGDPEQRYREDPVR
MLRAVRLAAKLDFEIEPTTAEPIPRLAGLLAEAAPARLFEEVLKLFLSGDGVASFEGLER
YGLLAALFPESAAALNSNRSGALRRMLIEGLRNTDARVANDEPVSPAFLFALLLWPAYCR
ALMALQKQGMQLEEAQRRAADRVTLHQLSTVALPRRFSLPMQEIWLLQSRFTSRQKKRVV
RTLSHPRFRAAFDFLILRQSASAEHEADIAYWRELQQQPGYAPPPRGFDPEIDYVGDEVA
MAPADSEETPKRRRRRRRRPDAAAPAE
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgccgttcactctgcagctgatcccgcgcgatcagcacaacgtctcgcgcaaggacatc
agtcccaatgcgttgcgcgtgctgtaccggctgcgcgaagccggcttcggcgcgtacttg
gtcggcggcgcggtccgcgacctgctggtcgagctgcagcccaaggacttcgacgtcgcc
accgacgctacccctgagcaggtcaagcagctgttccgcaactgccgcctgatcggccgc
cgcttccgcctggcgcacgtggtgtacggccgcgagatcatcgaagtggccacgttccgc
gccaacgtcgacgacggcagcggcgaccgcgagctcgacaacggccgcctggtccgcgac
aacgtctacggcagcatcgaggacgacgcggtacgccgcgacttcacctgcaacgcgctg
tactacgcgatcgaggatttctcggtgcgcgactacaccggcggcttcgccgacgtgcag
gcgcggctgatgcgcatgatcggcgaccccgagcagcgttatcgcgaggacccggtgcgc
atgctgcgcgcggtacgcctggccgccaagctggacttcgagatcgagccgaccaccgcc
gaaccgatcccgcgcctggccgggctgttggccgaagcggcgccggcacggctgttcgag
gaagtgctgaagctgttcctgtccggcgacggcgtggccagcttcgagggtctggagcgt
tacggcctgctcgccgcgctgttcccggagagcgccgcggcgctgaattccaaccgcagc
ggcgcgctgcggcgcatgctgatcgaaggcctgcgcaacaccgatgcacgcgtggccaac
gacgaaccggtgtcgccggcgttcctgttcgcgctgctgctgtggccggcctactgccgc
gcgctgatggcgttgcagaagcagggcatgcagctggaggaggcgcagcgccgcgccgcc
gaccgggtgaccctgcaccagctgagcacggtcgcgctgccgcggcgcttctcgctgccg
atgcaggaaatctggctgctgcagtcgcgcttcacctcgcggcagaagaagcgggtggtg
cgcacgctgtcgcatccgcgtttccgcgccgcattcgatttcctgatcctgcgccagtcc
gcctcggccgagcacgaggccgacatcgcctattggcgcgaactgcagcagcagcctggc
tacgcgccgccgccgcgcggcttcgacccggagatcgactacgtcggcgacgaggtggcg
atggccccggccgacagcgaggaaacccccaagcgccgccggcgccggcgccggcgtccg
gatgccgccgcaccggccgagtga
DBGET
integrated database retrieval system
