Xanthomonas sp. SS: HEP74_02651
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Entry
HEP74_02651 CDS
T09534
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
xas
Xanthomonas sp. SS
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xas01011
]
HEP74_02651
Enzymes [BR:
xas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HEP74_02651
Peptidoglycan biosynthesis and degradation proteins [BR:
xas01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HEP74_02651
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
DUF5305
Transglycosylas
SLT_2
Motif
Other DBs
NCBI-ProteinID:
QNH17497
LinkDB
All DBs
Position
complement(3248224..3249822)
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AA seq
532 aa
AA seq
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MPLSFRITHGWPAVAALALACAAPSAHAERVSARDKAAIEVLDQRLAAAEKRYNDAMVLV
GNSDPKGTQESDAALEDIEDVVDACIKQRGCQVGTYLSAYKRLLKAKADAQGAATDADAS
DDDATPLQADPDHISPLAANVPEAARAASLLNDQRHAFDAMVEYNPAVQAGIRRWLTDMR
PSLMNSYENYQNLRAIMWPEWEKRGLPEALLFGIIAKESNGRVHANSRVGAAGLMQFMPA
TGRRFGLGPDGTGFDTRYDARSAAEASAVYINERMAELNRSIELSLAGYNGGEGRAARVY
NQMQGRSFWDAQVYNQFPAETKDYVPMVIAAAWIFLHPQQYGVAFPKINAQPATLRLAKS
TTIYELTICLGSDGTRDGYMRALRNLNPRYEPDGWIPAGVTINATTKIVGLYNRYCVSGP
RADLARALITADVNAAIRSNTPVVADPTGNVAVGDVTPVAGVPTTIATGRPAPVKPKPKQ
VRSYRVAKGDTLGRIADRYSCDIKQLAKANGLRAPGYALKPGQSLKMTGCDK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcccctttcgttccgtatcacccatggatggcccgccgtggctgccttggcgctggct
tgcgccgcgccttctgcccacgccgaacgcgtctccgcgcgcgacaaggccgccatcgag
gtcctcgaccagcgcctggcggcggccgagaagcgctacaacgacgcgatggtgctggtc
ggcaacagcgaccccaagggcacccaggaaagcgatgcggcgctggaggacatcgaggac
gtggtcgatgcctgcatcaagcagcgcggctgccaggtcggtacctacctgagcgcgtac
aagcgcctgctcaaggccaaggccgacgcgcagggcgcggcgaccgatgccgatgcgagc
gacgatgacgccacgccgctgcaggccgatccggaccacatcagtccgctggccgccaat
gtgccggaagcggcgcgcgcggcgagcctgctcaacgaccagcgccatgccttcgacgcg
atggtcgaatacaacccggcggtgcaggccggcatccgccgctggctcaccgacatgcgt
ccgtcgctgatgaacagctacgagaactaccagaacctgcgcgcgatcatgtggccggaa
tgggaaaagcgcgggctgccggaggcgctgctgttcggcatcatcgccaaggaatccaac
ggccgcgtgcacgccaattcgcgggtcggcgccgccgggctgatgcagttcatgccggcc
accgggcgccgcttcgggctgggcccggacggcaccggcttcgatacccgctacgacgcg
cgcagcgccgccgaggccagcgcggtgtacatcaacgagcgcatggccgagctcaaccgc
agcatcgaactgtcgctggccggctacaacggcggcgagggccgtgccgcgcgcgtgtac
aaccagatgcaggggcgcagcttctgggatgcccaggtgtacaaccagttcccggccgag
accaaggactacgtgccgatggtgatcgccgcggcgtggatcttcctgcacccgcagcag
tacggcgtggcgttcccgaagatcaacgcgcagccggcgacgctgcgcctggccaagtcc
accacgatctacgagctgaccatttgcctgggcagcgacggcacccgcgacggctacatg
cgcgcgctgcgcaacctcaacccgcgctacgaacccgatggctggatcccggccggggtc
accatcaacgccaccaccaagatcgtcggcctgtacaaccgctattgcgtcagcggcccg
cgtgccgacctggcgcgtgcgctgatcaccgccgacgtcaatgccgcgatccgcagcaac
acgcccgtggtcgccgatcccaccggcaacgtggcggtgggcgacgtgaccccggtggcc
ggcgtgccgaccaccatcgccaccggacgcccggcgccggtcaagcccaagcccaagcag
gtgcgcagctaccgcgtggccaagggcgacaccctgggccgcatcgccgaccgctacagc
tgcgacatcaagcaactggccaaggccaacggcctgcgcgcgccgggctatgccttgaag
ccggggcagtcgctgaagatgactggctgcgacaagtag
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