Xanthomonas sp. SS: HEP74_03175
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Entry
HEP74_03175 CDS
T09534
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xas
Xanthomonas sp. SS
Pathway
xas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HEP74_03175 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xas03021
]
HEP74_03175 (rpoA)
03400 DNA repair and recombination proteins [BR:
xas03400
]
HEP74_03175 (rpoA)
Enzymes [BR:
xas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HEP74_03175 (rpoA)
Transcription machinery [BR:
xas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HEP74_03175 (rpoA)
DNA repair and recombination proteins [BR:
xas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HEP74_03175 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QNH18008
LinkDB
All DBs
Position
complement(3866886..3867884)
Genome browser
AA seq
332 aa
AA seq
DB search
MTVTANQVLRPRGPQIERLTDNRAKVVIEPLERGYGHTLGNALRRVLLSSIPGFAITEVE
IDGVLHEYTTVEGLQEDVLDVLLNLKDVAIRIHTGDSATLSLSKQGPGTVTAADIKTDHN
VEILNNDHVICHLTKDMAINMRLKIERGFGYQPAAARRRPDEETRTIGRLILDASFSPVR
RVAYAVESARVEQRTDLDKLVLDIETNGTIDAEEAVRTAADILSDQLSVFGDFTHRDRGA
AKPASNGVDPVLLRPIDDLELTVRSANCLKAESIYYIGDLIQKTEVELLKTPNLGKKSLT
EIKEVLAQRGLSLGMKLENWPPAGVAQHGMLG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgacggttaccgccaaccaggttctgcgcccccgtgggccgcagatcgaacgccttacc
gacaaccgcgccaaggtcgtaatcgagcccttggagcgcgggtatgggcacacgctgggc
aatgccctgcgtcgcgtgctgctgtcctcgatccccggcttcgcgatcaccgaagtcgag
atcgacggcgtgctgcacgagtacaccacggtcgaagggctgcaggaggacgtgttggat
gtcctgctcaacctcaaggacgtggccatccgcatacacaccggcgacagcgccacgctg
tcgctgtccaagcagggtccgggcacggtcactgccgccgacatcaagaccgaccacaac
gtcgagatcctcaataacgaccacgtgatctgccacctgaccaaggacatggcgatcaac
atgcgtctgaagatcgagcgtggcttcggctaccagccggccgccgcgcgtcgccgtccg
gacgaggagacccgcaccatcggtcgcctgatcctggatgcgtcgttctcgcccgtgcgt
cgcgtcgcctacgcggtcgagtccgcgcgcgtggagcagcgtaccgacctggacaagctg
gtcctggacatcgagaccaacggcacgatcgatgccgaggaagccgtgcgcaccgccgcc
gacatcctcagcgaccagctgtcggtgttcggcgacttcacccatcgcgaccgtggcgcg
gccaagccggccagcaacggcgtggatccggtgctgctgcgtccgatcgacgatctggaa
ctgaccgtgcgttcggccaactgcctgaaggccgagagcatttactacatcggcgatctg
atccagaagaccgaagtggaactgctcaagaccccgaacctcggcaagaagtcgctgacc
gagatcaaggaagtgctggcccagcgtggcctgtcgctcggcatgaagctggagaactgg
ccgccggccggcgtcgcccagcacggcatgctcggctaa
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integrated database retrieval system
