KEGG   Xanthomonas sp. SS: HEP74_03505
Entry
HEP74_03505       CDS       T09534                                 
Symbol
pel
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
xas  Xanthomonas sp. SS
Pathway
xas00040  Pentose and glucuronate interconversions
xas01100  Metabolic pathways
xas02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:xas00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    HEP74_03505 (pel)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HEP74_03505 (pel)
Enzymes [BR:xas01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     HEP74_03505 (pel)
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: QNH18333
LinkDB
Position
complement(4238324..4239475)
AA seq 383 aa
MKTQSLIASPRTLTHAIALAVCLAGATGSAYADASLEVASTGWATQNGGTKGGSKAAAAN
VYSVSTAAQLKTALKASVGSNGRIIKISGIIDVSEGTPYSTTADMKSRARLDVPTKTTLI
GVGSNAQIREGYLYVKANDVIIRNLTIENPWDPQPVWDPDDGSAGNWNSEYDGLTIEGAS
NVWVDHVTFTDGRRTDDQNGTANGRPKQHHDGALDVKKGANYVTISYSAFKSHEKNNLIG
SSDSASSTDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTSNAVYPFSHAHG
VGKESKIFSENNAFDIAGVSSCDKIAANYGGSVYRDFGSLLNGKALTCSWNNNIGWTPPY
TYSLLPANQVANDVKSKAGAGKL
NT seq 1152 nt   +upstreamnt  +downstreamnt
atgaagacacagtcactcatcgcatccccgcgcacgctcacccatgcgattgcgcttgca
gtctgtctggcgggcgcgaccggcagcgcctacgccgatgccagcctggaggtcgccagt
accgggtgggcgacgcagaacggcggtaccaagggcggttccaaggccgccgcggccaac
gtctacagcgtcagcaccgccgcgcagctgaagaccgcgctgaaggccagcgtcggcagc
aacggccgcatcatcaagatcagcggcatcatcgacgtcagcgagggcacgccgtacagc
accaccgcggacatgaagagccgtgcgcgcctggatgtccccaccaagaccacgctgatc
ggcgtcggttccaatgcgcagatccgcgagggctatctgtacgtcaaggccaacgacgtg
atcatccgcaacctcaccatcgaaaatccgtgggatccgcagccggtgtgggatccggac
gacggtagcgccggcaactggaattccgagtacgacggcctgaccatcgagggcgccagc
aacgtgtgggtggaccatgtcaccttcaccgacgggcgccgcaccgacgaccagaacggc
accgccaacggccgccccaagcagcatcacgacggcgcgctggacgtcaagaaaggcgcc
aactacgtgaccatctcgtattcggcgttcaagtcgcacgagaagaacaacctgatcggc
tccagcgacagcgcctccagcaccgacagcggcaagctgaaggtgaccatccacaacacg
ctgttcgagaacatttccgcgcgcgcgccgcgggtgcgttttggccaggtgcacctgtac
aacaactaccacgtcggcagcaccagcaacgcggtgtatccgttctcgcatgcgcacggc
gtcggcaaggagtcgaagatcttctccgagaacaacgccttcgacatcgccggggtcagc
agctgcgacaagatcgccgccaactacggcggcagcgtgtaccgcgatttcggctcgctg
ctcaacggcaaggcgctgacctgctcgtggaacaacaacatcggctggaccccgccgtac
acctattcgctgctgccggcgaaccaggtggcgaacgacgtcaagtccaaggcgggcgcc
ggcaagctctga

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