Xanthobacter autotrophicus: Xaut_0672
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Entry
Xaut_0672 CDS
T00581
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xau
Xanthobacter autotrophicus
Pathway
xau03420
Nucleotide excision repair
xau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Xaut_0672
03430 Mismatch repair
Xaut_0672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xau03400
]
Xaut_0672
Enzymes [BR:
xau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Xaut_0672
DNA repair and recombination proteins [BR:
xau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Xaut_0672
MMR (mismatch excision repair)
Other MMR factors
Xaut_0672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PhoH
AAA_16
AAA_22
AAA_25
UvrD_C_2
SLFN-g3_helicase
nSTAND3
DEAD
AAA_30
AAA_29
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ABS65924
UniProt:
A7ID31
LinkDB
All DBs
Position
complement(755313..757100)
Genome browser
AA seq
595 aa
AA seq
DB search
MEADGHLLVTGGPGSGKTTISILKAAQVAERDLRPGQKILFLSFARATVSRVVEAIEYEQ
QIPPAQKRHIDVETYHSFFWRILKAHGYLIGLPRRLFILTPPGEAIALSAARSGFPARNL
TDAQKAAKKVAEETERARLATEDGRVCFDLYAPYVGDPLHGSARIRRLIASMYPVIILDE
FQDTNEAQWRVVQALGEVCRLIALADPEQRIYDWIGADPARLDHFREAFKPTEVDLSTDN
HRSAGTEIALFGNDVLTGKFRQDSYKGIDFDVFDPFPDPAMTKLVTTVYKARKRLVDAGV
VNWSLAVLVPTKKMTRLVSDAFRQPPAGMVEVPHSAVIELEAAILGAEIIALLMQPADDR
HFGQFIDLMCNYFQGKGGDGPTQGALKEAANIRKAYDEWLACRAAGKAIRKNSMLVNMIA
VYEQARTAVLTGDPDEDWRAVRRVLEDGGCARLKEIGQEVRNLRILERGTQLRQELSQDW
RDSGGYRNALAITRQAFIQEHFSTNAKPESGVVVMNMHKAKGKQFDEVIIFEHWPIKRKG
QPPYNGDRIVRFNSREQIDDQARQNFRVSVTRGKRQTTILTPKCDPCVLLLGDDE
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacggccatctcctggtcacaggcgggcccgggtccggcaagactaccatc
tccatcctcaaggcggcgcaagtcgccgagcgggaccttcgccccggtcaaaagatcctg
ttcctcagctttgcccgcgccaccgtttcccgcgtagtcgaggcgatcgaatacgagcag
cagatcccgcctgcccaaaagcgccacatcgacgtcgaaacctaccattcctttttctgg
cgcatcctgaaggcccacggctatctcatcggcctgccacggcggctcttcattcttacg
ccgcccggcgaggccattgcgctctcggccgcccgatcaggttttcccgcccggaatcta
acggacgcgcagaaagcagcgaaaaaggtcgcggaagagacggaacgcgcgcgccttgca
acggaagacggccgtgtgtgctttgatctttatgccccctatgtgggcgaccctctccat
ggcagcgcgcgtattcggcgccttatcgccagcatgtaccctgtcatcatcctcgatgag
tttcaggacaccaacgaggcgcagtggcgtgttgtccaggcgctgggcgaagtctgccgc
ctgatcgccttggcggacccggagcaacgaatttacgactggatcggcgccgatcctgcc
cggctcgaccatttccgggaagccttcaagcccacggaagtggacctgagcacagacaat
caccgtagcgccggaaccgagatcgccctgttcggtaatgacgtgctcaccgggaaattc
cggcaggattcctataagggcatcgacttcgatgtcttcgacccgtttcccgatccggcg
atgaccaagctcgtgacgacggtttacaaggcgcggaagcgtctcgtggatgcgggcgtc
gtcaattggtcactggccgttctggtgccgacaaagaaaatgactcgcctggtatccgat
gccttccgccagcctcctgccggcatggtcgaggtgccccactcggcggtcatcgaactg
gaggccgccattctcggcgcggaaatcatcgcccttctcatgcagccggccgacgaccgc
catttcggccagttcatcgacctgatgtgcaactactttcagggcaagggcggcgatggg
ccgacacagggggcactcaaggaggccgcgaacatccgcaaggcctacgacgagtggctg
gcctgtcgggcggcaggcaaggcgatccgcaaaaacagcatgctcgtcaacatgattgcc
gtctacgagcaggcccgtaccgctgtgctgacgggtgaccccgacgaggattggcgcgca
gtgcggcgggttctggaggatgggggctgcgcgcgcctgaaggagattgggcaagaggtg
cgcaatctccgcatcctagagcgcggcacccaacttcgtcaggagctgtcccaagattgg
cgtgacagtggcggctatcgcaatgccctagctatcacgcggcaggcttttattcaggag
cacttctcgacgaacgcgaagcccgaatccggggtcgtcgtgatgaacatgcacaaggcg
aagggaaagcagttcgacgaggtcatcatctttgaacactggccgatcaagcgaaagggg
cagccgccctacaatggcgacaggatcgtgcgcttcaattccagggagcagatcgacgat
caggcgcggcagaatttccgtgtcagcgtgactagaggcaaacggcagacgaccattttg
acccccaaatgcgatccctgcgttctccttttgggagatgacgagtag
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