Xanthobacter versatilis: Xaut_1006
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Entry
Xaut_1006 CDS
T00581
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xau
Xanthobacter versatilis
Pathway
xau00061
Fatty acid biosynthesis
xau00071
Fatty acid degradation
xau01100
Metabolic pathways
xau01212
Fatty acid metabolism
xau02024
Quorum sensing
xau04146
Peroxisome
Module
xau_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Xaut_1006
00071 Fatty acid degradation
Xaut_1006
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Xaut_1006
09145 Cellular community - prokaryotes
02024 Quorum sensing
Xaut_1006
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xau01004
]
Xaut_1006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xau04147
]
Xaut_1006
Enzymes [BR:
xau01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Xaut_1006
Lipid biosynthesis proteins [BR:
xau01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Xaut_1006
Exosome [BR:
xau04147
]
Exosomal proteins
Exosomal proteins of breast milk
Xaut_1006
Exosomal proteins of breast cancer cells
Xaut_1006
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABS66257
UniProt:
A7IE14
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All DBs
Position
1127556..1129313
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AA seq
585 aa
AA seq
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MNVASIFAHMPDDRPCLLFDGATQSYAHVRAQAAGVRARLLAEGIGRGDFVALVLANGPD
FVASYLGVLSLGAVAVCINPMLAEAETAFILADSACRIALAEGDVAARLSLSGLPVLDAG
TAATGTWAVEDVADNHPAVVVYSSGTSGRPKGVMLSHGNVAFTARSKVRYMGVTGADRLL
LFLPLHHCFGQNAILWPALAAGACVVLQRRFDRAAVLQSLRADGVTMVFGVPTTFLALEG
RITAADGPRVRYWFSAAAPLPLEVEERWHRHMGLPIHQGYGQTECSPFATYNHAHSLRRG
KVGTAIDEVDLRIVDPADGRDLPKGEAGEIVLRGPNVMLGYLNRPADTAKAIRQGWLHTG
DIGRLDADGYLSVEDRLTDLIIIGGRNVYPAEVENALYSHPAVAEAAVYGVADPFLGEEV
WANVVLKPGVSIGAQELEAVCRRSLAAYKVPTAITFVDALPRNPTGKILKRELRAAAARP
ATQDLGRRVRGTDQEGSDLEAWVRDWLGRHLSLSPGAIERDRAFAEYGLDSVLGVALARE
LAAPLGRPVDLTVVWEASTLAGLLARLRGTATAPDAACCPVPATT
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcgccagcattttcgcccatatgcccgacgacaggccctgcctgttgttcgac
ggcgcgactcagtcctatgcccatgtccgggcccaggctgccggcgtgcgcgcacggctt
ctggccgaaggcatcgggcgcggggacttcgtggcgctggttctggccaacgggccggac
ttcgtggccagctacctcggcgtgctgagcctgggggccgtggcggtctgcatcaacccc
atgctcgcggaagcagaaaccgccttcatccttgccgacagcgcgtgccggatcgctctc
gcggagggggatgtcgccgcgcggttgtccctcagcggtctgcccgtgcttgatgccggc
accgccgccaccgggacgtgggcggtggaggatgtggcggacaaccatcccgccgtcgtc
gtctattcctccggcacctcgggccgccccaagggggtgatgctgtcccacggcaacgtg
gcgttcaccgcccgctccaaggtgcgctacatgggcgtcaccggcgccgaccgtctgctg
ctgttcctgccgctgcatcattgcttcggccagaacgccatcctctggcccgccctcgcc
gccggcgcctgcgtggtgctccagcggcggttcgaccgcgcggccgtgctgcaatcgctg
cgcgcggatggcgtgaccatggtgttcggcgtccccactactttccttgctctggaaggc
cgcatcactgcggccgacggcccccgcgtgcgctactggttttccgccgcagcgcctttg
ccactggaggtggaggagcgctggcaccggcacatgggcctgcccatccaccagggctac
ggccagaccgagtgctcgcccttcgccacctacaaccacgcccacagcctgcggcgcggg
aaggtcggcaccgccatcgacgaggtggacctgcgcatcgtcgatccggccgatggccgt
gacctgccgaagggcgaggcgggggagatcgtgctgcgcggccccaacgtcatgctgggc
tacctgaaccggccggcggataccgcgaaggccatccgtcaggggtggctgcacaccggc
gacatcggccgtctggatgccgacggctatctctcggtggaggaccggctgacggacctc
atcatcattggcggccgcaacgtctatcccgccgaggtggagaatgcgctgtacagccac
ccggcggtggccgaggcggcggtctatggcgtcgccgacccgttcctcggcgaggaggtc
tgggccaatgtggtcctgaagcccggcgtcagtatcggcgcgcaggagttggaggcggtc
tgccggcggagccttgccgcctacaaggtgcccacggccatcaccttcgtggatgccctg
ccgcgcaaccccacgggcaagatcctgaagcgcgagttgcgcgctgccgccgcccggccg
gcgactcaagacctggggcgccgggtgcgcggcacggatcaggagggttcggaccttgaa
gcctgggtgcgcgactggctcggccgccatctcagcctgtcccccggcgccatcgagcgc
gaccgcgccttcgccgaatacgggctggattcggttctgggtgtcgctctggcgcgtgag
cttgccgcgccgctcgggcggcccgtggacctgactgtggtgtgggaggcatcgaccctt
gccgggttgctggcgcgcctgcgcggaaccgccaccgccccggacgcggcctgctgcccc
gtccctgcgaccacatag
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