Xanthobacter autotrophicus: Xaut_1589
Help
Entry
Xaut_1589 CDS
T00581
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xau
Xanthobacter autotrophicus
Pathway
xau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Xaut_1589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xau03019
]
Xaut_1589
03009 Ribosome biogenesis [BR:
xau03009
]
Xaut_1589
Enzymes [BR:
xau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Xaut_1589
Messenger RNA biogenesis [BR:
xau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Xaut_1589
Ribosome biogenesis [BR:
xau03009
]
Prokaryotic type
rRNA helicases
Xaut_1589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABS66836
UniProt:
A7IFP3
LinkDB
All DBs
Position
1798934..1800763
Genome browser
AA seq
609 aa
AA seq
DB search
MTTNPALARALAERDYNDPTPVQLAVLAPEASGRDLLVSAQTGSGKTVAYGLAMADTLLG
TDERFGPATAPQALVVAPTRELALQVQREFEWLYAATGARIVSCVGGMDPRQEQRALSRG
AHMVVGTPGRLRDHLERGRLDISAVRVVVLDEADEMLDLGFREDLQFILDATPPERRSLL
FSATLPRGITMLAKRYQREALRIEVASAEGGHADIEYRAMRVVPKEIEHAVVNVLRFYDA
PSAIVFCNTRETVRHLHATLQERQFSAVALSGELSQNERNSALQALRDGRARVCVATDVA
ARGIDLPSLGLVIHADLPNDAESLQHRSGRTGRAGRKGVSVLLVPPFRRRRTEDMLRGMG
LTPAWSGPPTADEIRKLDHERMLRDPLLTDEPNEEDAAVARALLEQQPAEHLVAALVRLY
RAGLPSPEEVADPGEPRGRDRAAARGLGGPGGAGGGAWFRLNIGRRNKADPRWLLPLICR
RGNVTRDDIGAIRIFDEETAFEVSAAALDRFSTSARKSDGSDVIIEPLPGGAPSSRPERP
APRWKGPQDKQRYDKPGYEKPGQDRPGRAKPFRDKAGPGKGGKPPSRGPADRGPGTFAGK
PAGKKPRRP
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaacccggcgctcgcccgcgctttggccgagcgggactacaacgatccgacg
ccggtgcagcttgccgtgcttgcccccgaggcgtcggggcgcgacctcctcgtgtccgcg
cagaccggatccggcaagacagtggcctatggcctcgccatggcggacacgctgctgggc
acggatgagcgcttcggtcccgccacggcaccgcaggcgctggtggtggcccccacccgt
gaactggccctgcaggtccagcgcgagttcgagtggctttatgcggcgacgggtgcgcgc
atcgtctcctgcgtcggcggcatggacccacgccaggaacagcgcgcgctcagccggggc
gcccacatggtggtcggcacccccggccgcctgcgcgaccatctggagcggggccggctc
gatatctccgccgtgcgggtcgtcgtgctggacgaagccgacgaaatgctcgacctcggc
ttccgcgaggatctccagttcatcctcgacgccaccccgccggagcggcgcagcctgctg
ttctcggcgacgctgccgcgcggcataaccatgctggccaagcgttaccagcgcgaggcc
ctgcgcatcgaggtggcgagcgccgagggcggccatgccgacatcgaataccgcgccatg
cgcgtggtaccgaaggagatcgagcacgccgtcgtcaacgtgctgcgcttttatgatgcg
ccgagcgccatcgtgttctgcaacacccgcgaaaccgtgaggcacctgcatgcgaccctt
caggagcggcagttttcggccgtcgctttgtccggcgagctgagccagaacgagcgcaac
tccgcacttcaggccctgcgcgacggccgagcgcgggtgtgcgtcgccaccgacgtggcg
gcgcgcggcatcgatctgccgagcctcggcctcgtcatccatgccgacctgccgaacgac
gccgagagcctccagcaccgcagcggccgcaccggccgggccggccgcaagggcgtcagc
gtgttgctggtgccaccgtttcgccgccgccgcaccgaggacatgctgcggggcatgggc
ctgaccccggcctggtcgggaccgcccaccgccgacgagatccgcaagctcgaccacgag
cgcatgctgcgcgatccgctgctcaccgacgagccgaacgaggaggacgccgccgtcgcc
cgcgccctgctggagcagcagccggccgagcatctggtggcggcgctggtgcgcctttat
cgcgctggcctgccctcacccgaggaggtggccgaccccggcgagccgcgcggccgcgac
cgtgccgccgcgcgcgggctcggaggacctggcggcgccggtggcggggcgtggttccgc
ctcaatatcgggcgccgcaataaggcggacccgcggtggctgctgccgctgatctgccgc
cgcgggaacgtgacccgcgacgacatcggcgccatccgcatcttcgacgaggagaccgcc
ttcgaggtgagcgccgccgccctcgaccgcttcagcacgtccgcgcgcaagtccgatggc
tcggacgtgatcatcgagccgctgcccggcggcgcgccgtcgagccgtcccgagcggccg
gcgccgcgctggaaggggccccaagacaagcagagatacgacaagccgggctatgaaaag
ccggggcaggaccggccgggccgggccaagccgttccgcgataaggccggaccgggcaag
ggcgggaagccgccaagccgaggtcctgcggatcgcggtccgggcaccttcgcgggcaag
ccggcaggaaagaagccgcgccgcccctga
DBGET
integrated database retrieval system
