Xanthobacter autotrophicus: Xaut_2426
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Entry
Xaut_2426 CDS
T00581
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
xau
Xanthobacter autotrophicus
Pathway
xau03030
DNA replication
xau03430
Mismatch repair
xau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Xaut_2426
03430 Mismatch repair
Xaut_2426
03440 Homologous recombination
Xaut_2426
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xau03032
]
Xaut_2426
03400 DNA repair and recombination proteins [BR:
xau03400
]
Xaut_2426
Enzymes [BR:
xau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Xaut_2426
DNA replication proteins [BR:
xau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Xaut_2426
DNA repair and recombination proteins [BR:
xau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Xaut_2426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS_4
DEDDh_C
PAS_7
DNA_pol_A_exo1
PAS_9
HATPase_c
Motif
Other DBs
NCBI-ProteinID:
ABS67668
UniProt:
A7II25
LinkDB
All DBs
Position
complement(2710409..2712568)
Genome browser
AA seq
719 aa
AA seq
DB search
MSFDRRLALIVLAPGALLGLWLLGGAGLLYAALGPADRAAITDTVAPLIDSHGMLVVLWW
FLAALGTGVVALRLHAIYGEAPARLADATRVLAGDAAAPPLPPQSGTGMRALGEAINALA
GQRRALQDDMARLIAEASRDVALQRDQLAALMAELEQSVVVLNLEGRILLYNARARALFR
TLSQAPGGVAGAELIGLGRSIHAVIDRALIDHAREGIARRIARGDAQASARFVTTTPLGH
LIQVSLAPVRAAADDKGDVTGFVLLLDDITDEYEARSRQDRRWLDLSEASRASFASMQAA
LDMLDYPDLEPADRERFQAVVRDEVGVMSQRLTTLAADASHDMKTRWPLQDMLGADLAAA
AAQRITAETGQAVDTVAVDADLWLSVDSFALIQALAFLAARLSETLKAPNLALRLAPAGG
RAHLDLAFQGTGSGLDLAGWQTRPMQTSDAPSPLTVRDVVERHGGELWLEHARDGSGALF
RFLLPVAAGTVAPVPAPGDSRPAYYDFDLFAASAQSRESDDRPLGEIAYTVFDTETTGLD
PAGGDEILQIGATRIVNGRLLASECFDQLVDPQRSIPEAGIAVHGIRPEMVRGKPTLPQV
LPAFHAFAADTVLVGHNVAFDMRFLTLKENASGVRFDQPVLDTLLLAAIVHPGEDSHGLE
AMAARLGIAVSGRHTALGDALATAEIFLKLLPLLRQRGIVTLGQARAAAQTSYYARLRY
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgaccggcgcctggcgctgatcgtgctcgcgccgggcgcacttctcgggctc
tggctcctcggcggcgccggcttgctttatgcggctctcggccccgccgaccgcgccgcc
atcaccgacaccgtcgcgccgctgatcgacagccacggcatgctggtggtgctgtggtgg
ttcctggccgcgctcggcaccggcgtcgtcgccctgcgcctgcatgccatctatggggag
gcgccggcccgtctcgccgatgccacccgcgtgctggccggcgacgccgccgccccgccc
cttcccccgcagtccggtaccggcatgcgcgcgctcggcgaagccatcaacgccctcgcc
ggccagcgccgcgccctacaggacgacatggcccgcctcatcgccgaggccagccgcgac
gtggcgctccagcgcgaccagctcgccgccctgatggcggagctggagcaatcggtggtg
gtgctcaatctcgaagggcggatcctgctctacaatgcccgcgcccgcgccctcttccgc
accctctcgcaggcgccggggggcgtggccggcgcagaattgatcggtcttggccgctcc
atccatgcggtcatcgaccgtgccctcatcgaccatgcccgcgaaggcatcgcccggcgc
atcgcccgcggcgacgcccaggcttcggcgcgcttcgtgaccacgacgccccttggccat
ctcatccaggtgtcgctggccccggtgcgcgcggcggcggacgacaagggcgatgtcacc
ggcttcgtgctgctgctggacgacatcactgacgaatacgaggcgcgctcccggcaggat
cgccgctggctcgacctctcggaggcgagccgggcctccttcgccagcatgcaggccgcc
ctcgacatgctggactatccggacctcgagcccgccgaccgcgagcgcttccaggccgtg
gtgcgcgacgaggtgggggtgatgagccagcgcctcaccacgctcgccgccgacgcctcc
cacgacatgaagacccgctggccgctgcaggacatgctgggcgccgaccttgccgccgcc
gccgcccagcgcatcaccgccgagaccgggcaggcggtggacacggttgcggtggacgcc
gacctctggctgagcgtggacagcttcgccctgatccaggccctcgccttcctcgccgcg
cgcctgtccgagacgctgaaggccccaaatctcgccctgcgcctcgcgccggcgggcggg
cgagcccatctcgacctcgcattccagggcactgggtccggcctcgacctcgccggctgg
cagacccgccccatgcagacctccgacgccccctcccccctcacggtgcgcgacgtggtg
gaacggcacggcggagaattgtggctggagcatgcgcgcgacggctcgggggccctgttc
cgcttcctgctgccggtggccgccggcacggtggcgccggtgccggcccccggcgacagc
cgcccggcctattatgatttcgacctgttcgccgcgagcgcgcagagccgcgagagcgac
gaccgtccgctgggcgagatcgcctatacggtgttcgacaccgagaccaccggccttgat
cccgccggcggcgacgaaatcctccagatcggcgccacccgcatcgtcaacggccggctg
ctcgccagcgaatgcttcgaccaattggtggacccgcagcgctccatcccggaggccggc
atcgcggtgcacggcatccggccggagatggtgcgcggcaagccgacccttccccaggtg
ctccccgccttccacgccttcgccgccgacaccgttctggtgggccacaacgtggccttc
gacatgcgctttttgaccctcaaggaaaacgccagcggcgtgcgcttcgaccagccggtg
ctcgacaccctgttgctcgccgccatcgtccatcccggggaggacagccacggactggag
gccatggcggcgcgcctcggcatcgccgtctccggccgccacacggcactgggggacgcg
ctggccaccgccgagatcttcctgaagctgctgccgctgctgcgccagcgcggcatcgtc
accctcgggcaggcccgcgcggcggcgcagacctcctattacgcgcgcctgcgctattga
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