Xanthobacter versatilis: Xaut_3300
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Entry
Xaut_3300 CDS
T00581
Name
(GenBank) Double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
xau
Xanthobacter versatilis
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xau03400
]
Xaut_3300
Enzymes [BR:
xau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Xaut_3300
DNA repair and recombination proteins [BR:
xau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Xaut_3300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_19
DEAD
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ABS68529
UniProt:
A7IKI6
LinkDB
All DBs
Position
3668182..3671685
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AA seq
1167 aa
AA seq
DB search
MSADLTPEATPDAARDPKSEATRRQSEASHPAFSAWVSANAGSGKTHVLARRVIRLLLAG
TPPGRILCLTYTKAAAANMANRVLAILGRWVRLPDAELDDAIRDTVGSPPDAALRARARR
LFAAALETPGGLKIQTIHAFCGALLHRFPFEADVAAGFGELDEVGRQELMARIRADLVVA
ASRTPNALLGEALARLTEDMSDSGLSGLLEAAVALRARILPLGDTPRARRAAVARALDLP
ADASVADLEVQMLASPHLPHSEWASAAAELAASDKATDRTRGDDLLAAAEAGDTASGLAA
WRRVFFGSEGPRSDRNLFTKGFADRAPGLAARLRDERDRLAVLADQLLGARTLERTEAAL
TLAAEAVRRYEAEKAARGLLDFDDLIVKAAQLLSDQPTFVQYKLDQGIDHILVDEAQDTS
PQQWRVVQGLADDFFSGAGAREDVTRTLFVVGDEKQSIFSFQGADPRAFGEMRSTFARKA
GPQALRRVELPHSFRSAPGVLEAVDQIFSRPEAHDGLTLDAVAPVHAAIRADAPALVEIW
PTTTPEPATQPDNWRRPLDEAPVDDPVSRLAQRIAGFIQAGIAKGLAIPSRQGRPMRAGD
VLVLVRRRGRVFEAVIRALKELKDAQVEVAGADRLVVAEHIAALDLMALGDTLVSPDDDL
ALAALLKSPLFGLTDDDLLALCTGRSGRLVDALKAAPDPRHAAAWARLAAWRGEAALLRP
FDFYARVLGRDGGRRAMLARLGPEAADVLDEFMVLARAYESTEPASLAGFLAYLRRGGAE
TKRDMESGRNEVRVMTVHGAKGLEAPIVILADTVDMPKARTAGGLVSVAGPEGEVPVLAP
RKAEDPERLAAARATAAARELEEHRRLLYVALTRAEDAVIVCGAETRSPAKDKAHARPEG
CWYELVRAALAPEADEQNALGFEGQVLRWNKGPGLAVAGPAAAPSAAGAEPALPIFANPP
PPEAAPRLLRPSKTEAAGPSPLRTPGPETALSPLVRGDLVHRLLAGLPDLPAQERAAAGL
RLLRHAADKVADEIHQEVLEEALGVLGHAPLADLFGAGSRAEVPVIGRLKAQEGADFHVS
GRIDRLAVTPDLLIVADFKTDRIPPQRPEDVAEAYVAQLAVYGALLSQVFAGRAFEARLV
YTTGPRVFRLESARLQAALARLGLTSP
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgaccttacccccgaagccacccccgatgccgcccgcgatcccaagtcagag
gcgacgcgccgccagtcggaggcctcccatcccgccttctcggcctgggtgtccgccaat
gccggctcgggcaagacccatgtgctggcgcgccgcgtcatccgcctgctgctcgccggc
acgccgccggggcgtatcctgtgcctcacctataccaaggcggcggcggccaacatggcc
aaccgcgtgctggccatccttggccgctgggtgcgcctgcccgatgcggagctggacgac
gccatccgcgacacggtgggctcgccccccgacgccgccctgcgcgcccgcgcccgccgg
ctgttcgccgccgcgttggagacgccgggcgggctgaagatccagaccatccacgccttc
tgcggcgccctgctgcatcgctttccgttcgaggcggacgtggccgccggcttcggcgag
ctggacgaggtgggccggcaggaattgatggcccgcatccgcgccgacctcgtggtggcg
gccagccgcacgcccaacgcgctccttggcgaggcgttggcgcggctgaccgaagatatg
tccgacagcggcctctcgggcctgctggaggccgccgtcgccctgcgcgcccgcatcctg
ccgctgggcgacacgccgcgcgcgcggcgggcggcggtggcgcgggcgctggatctgcca
gcagatgcgagcgtggcggatctggaagtgcagatgctggctagcccccatctgcctcat
tccgaatgggcgagcgcggcggcggaactggccgcttccgacaaggccaccgaccgcacc
cgaggcgacgatcttctggccgccgccgaggcgggggacacggcgtccggccttgccgcc
tggcggcgggtgttcttcggctcggagggaccgcgctcggaccgcaacctcttcaccaag
ggcttcgctgaccgtgcccccggccttgccgcgcggctgcgggacgagcgggaccgcctc
gcggtgcttgccgaccagctgctgggtgcccgcaccctggagcggaccgaggcagcgctg
accctcgcggccgaagccgtccgccgctacgaggcggagaaggcggcgcgcgggctgctg
gatttcgacgacctcatcgtcaaggccgcccagcttctgtcggaccagcccaccttcgtg
caatacaagctggaccagggcatcgaccacatcctggtggacgaggcccaggatacgagc
ccgcagcagtggcgggtggtgcagggcctcgccgacgatttcttctccggcgccggcgcg
cgggaggacgtgacccgcaccctgttcgtggtgggcgacgagaagcagtccatcttctcc
ttccagggcgccgatccgcgcgccttcggcgagatgcgctcgaccttcgcacgcaaggcg
gggccacaggccctgcggcgggtggagctgccccattccttccgctccgcccccggcgtg
ctggaggcggtggaccagatcttctcccgccccgaggcccatgatggcctcacgctggac
gccgtggcccccgtgcacgccgccatccgcgccgatgctccggccctggtggagatctgg
cccaccaccacgcccgagcccgcaacccagcccgacaattggcgccgcccgctggacgag
gcgccggtggacgacccggtgagccggctcgcccagcgcatcgccggcttcatccaggcg
ggcatcgccaagggcctcgccatcccctcccggcaggggcggcccatgcgggcgggcgac
gtgctggtgctggtgcgccggcgcgggcgggtgttcgaggccgtcatccgcgccttgaag
gaattgaaggacgctcaggtggaagtggcgggcgccgaccgcctggtggtggccgagcat
atcgccgccctcgacctgatggcgctgggcgatacgctggtctcccccgacgacgacctg
gcgctggcggccctgctgaagagccctctgttcggcctcaccgacgacgatctcctggcc
ctgtgcaccggccggagcgggcggctggtggacgcgctcaaggcggcgccggatccgcgc
catgctgcagcctgggcgcggctcgccgcatggcgcggggaggcggccttgctgcggccg
ttcgatttctacgcccgcgtgctggggcgcgacggcggccggcgcgccatgctggcccgg
ctcggtcccgaggctgcggacgtgctggacgaattcatggtgctggcccgcgcctacgaa
tccacagagccggcgagccttgccggcttcctcgcctatctgcgccggggcggtgccgag
accaagcgcgacatggagagcggccgcaacgaggtgcgggtgatgaccgtgcacggcgcc
aagggccttgaagcgcctatcgtcatcctcgccgacacggtggacatgccgaaggcccgc
accgccggcggtcttgtgagcgtggcggggccggagggggaggtgccggtgctggccccg
cgcaaggcggaggacccggagcgcctcgccgccgcccgcgccacggccgccgcccgcgag
ctggaggagcaccggcgcctgctctatgtggccctcacccgggccgaggatgcggtgatc
gtctgcggcgcggagacccgatcgccggccaaggacaaggcccatgctcgtccagagggc
tgctggtacgagctggtgcgcgccgccctcgcgccggaggcggacgagcagaatgccctc
ggctttgagggccaggtgctgcgctggaacaaggggccgggcctcgccgtggccgggccg
gcggcggccccttccgcggctggggcagagccggcgctgccgattttcgccaatccaccg
cccccggaagccgcgccgcgcctgctgcggccttccaagaccgaggcggccggtccctcg
cccttgcgcacgccgggaccggagacggcgctgtcgcccctggtacggggcgatctggtc
catcgcctgctcgccggcctgcccgacctgccggcacaagagcgcgcggcggcgggcctg
cgccttctgcggcacgcggcggacaaggtggcggacgagattcatcaggaggtgctggag
gaagcgctgggcgtcctcggccatgcgccgctcgcggacctgttcggcgccggaagccgg
gcggaagttccggtcatcggccggctgaaggcgcaggagggcgcggatttccacgtttcc
ggacgaattgaccggctggcggtgacgcccgacctgctgatcgtcgccgacttcaagacc
gaccgcatcccaccccagcggccggaagacgtggccgaggcttatgtggcgcagcttgcc
gtctatggcgctcttctgtcgcaggtgttcgccgggcgggccttcgaggcgcggctggtc
tatacgacgggtcctcgcgttttccggctcgaatccgcccgtttgcaggcggcgctggcc
cggctcggtctcacctcgccgtga
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