Xanthobacter autotrophicus: Xaut_3914
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Entry
Xaut_3914 CDS
T00581
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xau
Xanthobacter autotrophicus
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xau03032
]
Xaut_3914
03400 DNA repair and recombination proteins [BR:
xau03400
]
Xaut_3914
Enzymes [BR:
xau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Xaut_3914
DNA replication proteins [BR:
xau03032
]
Prokaryotic type
DNA Topoisomerases
Xaut_3914
DNA repair and recombination proteins [BR:
xau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Xaut_3914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
HTH_Tnp_1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABS69138
UniProt:
A7IM95
LinkDB
All DBs
Position
complement(4331621..4334326)
Genome browser
AA seq
901 aa
AA seq
DB search
MQVVIVESPAKAKTINKYLGPGYEVIASYGHVRDLPSKDGSVDPDADFRMLWEVDPKAQK
RLNEIATAVKGADGLILATDPDREGEAISWHVLEVLKQKKALKDQKVERVVFNAITKQAV
LDAMKAPRAIDVALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EREIETFVQKEYWSILARLATPRAEEFEARLTGADGKKITRLSVGTAEEAKAFRAALEAA
DFRVRSVEAKPMRRHPQPPFTTSTLQQEASRKLGLAPARTMQIAQRLYEGVDVGGETVGL
ITYMRTDGVDMAPEAVAATRSAIGKQFGPKYLPGVPRKYTTKAKNAQEAHEAIRPTDPSR
HPREVARHLDGEQAKLYELIWIRTVASQMESAELERTTADIEAKAGGRTLDLTATGTVVK
FDGFLTLYREGKDDEDDDEESRRLPAMSANEKLNRRDILTTQHFTEPPPRYSEASLVKRM
EELGIGRPSTYAAVLAVLRDREYVKLEKKRLVPEDKGRLVTAFLESFFKRYVEYDFTADL
EEKLDEVSAAELDWKEVLRAFWQDFHTAVEATKDLRVSQVLDALDEMLTAHIFPPTQDGS
DPRLCPTCGNGRLSLKMGKFGAFIGCSNYPECRHTRPLTGDGAPEGDGKRELGIDPESGE
DVTIRAGRFGTYLQLGEGKDGEKPKRSSLPKGLAPADVDLETALKLLALPREVGKHPEDG
EPILAGIGRYGPYVQHGRTYANIEDGDDILAIGLNRAVVLIAEKQSKGRGGRGAATPGRT
LGDHPTLGGPVTVRPGRFGPYVNHGKVNATLPKSVDPEALTLAEAVTLIDAKAALSPSKA
KAPRKAATKAAASGEDAPAKAATKTAAKKPAAKSAAKKTATKQPAAKKTTKTASKGPKAA
E
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgtcatcgtcgaatcgccggctaaggcgaagacgatcaacaaatatctcggt
cccggctacgaggtgatcgcctcctacggccacgtgcgcgacctgccctccaaggatggc
tccgtcgaccccgatgcggatttccgcatgctgtgggaggtggaccccaaggcgcagaag
cggctgaacgagatcgccaccgcagtgaagggggccgacggcctcatcctcgccaccgac
ccggatcgcgagggcgaggccatctcctggcacgtgctggaggtgctgaagcagaagaag
gcgctcaaggaccagaaggtcgagcgcgtggtcttcaacgccatcaccaagcaggccgtg
ctggacgccatgaaggcgccccgcgccatcgacgtggcgctggtggacgcctacctcgcc
cgccgcgccctcgactatctggtgggcttcacgctctccccggtgctgtggcgcaagctg
cccggcgcccgctcggcaggccgggtgcagtcggtggcgctgcgcctcgtctgcgaccgc
gagcgcgagatcgaaaccttcgtccagaaggaatactggtccatcctcgccaggctcgcg
acgccccgcgccgaggagttcgaggcccgcctgacgggcgccgacggcaagaagatcacc
cgcctctccgtgggcacggcggaggaggccaaagccttccgcgcggcactggaggcggcc
gacttccgcgtgcgctcggtggaagccaagcccatgcggcgccatccgcagccgcccttc
accacctccaccctgcagcaggaggccagccgcaagctgggccttgcccccgcccgcacc
atgcagatcgcccagcgcctctacgagggcgtggatgtgggcggcgagacggtgggtctc
atcacctatatgcgaaccgacggcgtggacatggcgcccgaggcggtggccgccacccgc
agcgccatcggcaagcagttcgggccaaagtatctgcccggggtgccgcgcaaatacacc
accaaggccaagaacgcccaggaagcccacgaagccatccgccccaccgacccgtcgcgc
catccccgcgaggtggcgcgccatctcgatggcgagcaggccaagctctatgagctgatc
tggatccgcaccgtggcgagccagatggaatcggcggagctggagcgcaccaccgccgat
atcgaggcgaaagccggcggccgcaccctcgacctcacagccaccggcacggtggtgaag
tttgacggcttcctcaccctctatcgcgagggcaaggacgacgaggacgacgacgaggag
agccgccgcctgccggccatgagcgccaacgaaaagctcaaccggcgcgacatcctcacc
acccagcacttcaccgagccgccgccgcgctattcggaagcctcgctggtgaagcgcatg
gaggagctgggcatcggccggccctccacctatgccgccgtgctcgcggtgctgcgcgac
cgcgaatatgtgaagctcgagaagaagcgcctggtgccggaggacaagggccggctcgtc
accgccttcctcgaaagcttcttcaagcgctacgtggaatacgacttcaccgccgatctc
gaagagaagctggacgaggtctccgccgccgaactcgactggaaggaggtgctgcgcgcc
ttctggcaggacttccacaccgccgtggaggccaccaaggacctgcgcgtctcccaggtg
ctcgacgccctggacgagatgctcaccgcccacatcttcccgccgacccaggacggttcc
gacccgcgcctgtgccccacctgcggcaacgggcggctgtcgctgaagatgggcaagttc
ggtgccttcatcggctgctcgaactatcccgagtgccgccacacccgccccctcaccggc
gacggcgcccccgagggcgacggcaagcgtgagctgggcatcgatccagagagcggcgag
gacgtgaccatccgcgccgggcgcttcggcacctatctccagctcggcgagggcaaggat
ggggagaagcccaagcgctcctccctgcccaagggcctcgccccggcggacgtggacctg
gaaaccgcgctgaagctgctggccctgccgcgtgaggtgggcaagcatcccgaggacggc
gagcccatcctcgccggcatcgggcgctatggaccttatgtgcagcacgggcggacctac
gccaacatcgaggacggcgacgacattctcgccatcggcctcaaccgggcggtggtgctg
atcgccgagaagcagtccaagggccgcggcgggcgcggggcggcgacgccggggcggacc
ctgggcgatcaccccaccctcggcggaccggtcacggtgcggcctggccgcttcgggcct
tatgtgaaccacggcaaggtcaacgccaccctgcccaagtcggtggatcccgaagccctc
accctcgccgaggcggtgaccctcatcgacgccaaggcggccctgtcgccctccaaggcg
aaggcgccccgcaaggcggccaccaaggcggccgcatccggcgaggatgctccggccaag
gcggccaccaagacggcggcgaaaaagccggcggcgaaatccgccgccaagaagaccgcg
acgaagcagcccgccgcgaagaagacgacgaagaccgccagcaaggggccgaaggcggcc
gaatag
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