Xanthobacter autotrophicus: Xaut_4284
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Entry
Xaut_4284 CDS
T00581
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xau
Xanthobacter autotrophicus
Pathway
xau03030
DNA replication
xau03430
Mismatch repair
xau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Xaut_4284
03430 Mismatch repair
Xaut_4284
03440 Homologous recombination
Xaut_4284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xau03032
]
Xaut_4284
03400 DNA repair and recombination proteins [BR:
xau03400
]
Xaut_4284
Enzymes [BR:
xau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Xaut_4284
DNA replication proteins [BR:
xau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Xaut_4284
DNA repair and recombination proteins [BR:
xau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Xaut_4284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
DUF655
Motif
Other DBs
NCBI-ProteinID:
ABS69505
UniProt:
A7INB1
LinkDB
All DBs
Position
4749247..4752699
Genome browser
AA seq
1150 aa
AA seq
DB search
MPDPGFIHLHVHSSYSLLEGALSIGKLADLVKADAQPAIALTDTGNLFGALEFSEKMSGA
GIQPIAGVSLALDLPEPAGPRGAIRPKRPRIVLLAQSEPGWRNLMRLVSRSFLETASEDE
PRILPDWLADAHDGLIALTGGPAGPIDKALVSGHPELAAERLDLLASLFGDRLYVEVQRH
DTDAERLAEAGLLELAYAKGLPLVASNEPFFASKTDYEAHDGLLCIAEGRLLSEGDRRRL
TPEHRFKTRAEMLALFADLPEATANTVEIARRCAYRVRTVKPILPRFTSGGGDGDPLAEE
AAELERQAKEGLAQRLEKHGPAPGLDIATYEERLAYELSVITKMKFPGYFLIVSDFIKWA
KAHDIPVGPGRGSGAGSLVAYSLQITDLDPIRFGLLFERFLNPDRVSMPDFDVDFCQERR
DEVIHYVQERYGRAQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPANPV
TLKQAIEDEPRLQASRDQEEVVKRAFDIAVRLEGLNRHASTHAAGIVIGDRKLHELVPLY
RDPKSDMPVTQYNMKWVEQAGLVKFDFLGLKTLTTIDKAVKLIHQRGIDLDISKIPLDDP
KTYAMLGKGETVGVFQVESAGMRRALVDMKADRVEDLIALVALYRPGPMANIPVYCDCKH
GRAKPDYLHPMLEPYLKETFGVIIYQEQVMQIAQAMAGYSLGEADLLRRAMGKKIRAEME
KQRERFVSGSAGRGIEKAQADTIFDLLAKFADYGFNKSHAAAYAIVAYQTAWLKANYPTE
FLAASMTLDMGNTDKLAEFRQEAQRLGIEVVPPNINLSAREFAVKDGKIIYAMCAIKGVG
GAAVDALVAARGDRPFRSFADFASRLPVKLVNKRTLESLMAAGCFDVLEKNRARAFAAIE
SIVAEAQRVEANAQSGQNDMFGSGPSAVSLPIPEVAPWLPSERLQKEYDAIGFFLTGHPL
DDYADALKKMRVQSFSDFSRAVRSGAAAGRLAATVVSKQERRTKSGTRMGIVGLSDPSGH
YEAVIFSEGLAHYRDLLEPGTPLLMMVAAELNGEDVRVRINSCEKLDPVTARHQKGLRIF
LRSPEPIEGIARRLADGKTVDAGSGEVSLILMVEDARAEVEVSLPGKYPISPQIAGAIKA
IPGVVAIESA
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcccggcttcatccatcttcacgtccattcctcctattcgctgctggagggg
gcgctttccattggcaagctggccgacctcgtgaaggcggatgcgcagccggccattgcg
ctcaccgatacgggcaatctgttcggcgcgctggaattctccgagaagatgtcgggcgcc
ggcatccagcccatcgccggtgtgtccctcgccctggacctgccggagccggcaggcccg
cgcggggcgatccggccgaagcggccgcgcatcgtgctgctggcccagtcggagccgggc
tggcgcaacctgatgcgactggtctcccgctcatttcttgaaaccgccagcgaggacgag
ccgcgcatcctgcccgactggctggccgatgcccatgacggcctcatcgccctcaccggc
gggccggccggccccatcgacaaggcgctggtgtccggccatccggagctggcggcggag
cggctcgacctgctcgcctcgctgttcggcgaccggctctatgtggaagttcagcgccac
gacaccgacgccgagcgcctcgccgaagccgggctgctggaactggcctatgccaagggc
cttccgctggtcgcgtccaacgagcccttcttcgccagcaagaccgattatgaggcccac
gacgggctcctgtgcatcgccgagggccggcttttgtcggaaggcgaccggcgccggctg
acgcccgagcaccgattcaagacccgcgcggaaatgctcgccctgttcgccgacctgccc
gaggccacggccaacacggtggagatcgcccggcgctgcgcctaccgggtgcgcaccgtg
aagcccatcctgccgcgcttcacctcgggtggaggggacggcgatcccctggccgaggag
gccgccgagctggagcggcaggcgaaggagggcctcgcccagcgcctcgaaaagcacggg
ccggcgccggggctggacatcgccacctatgaggagcggctcgcctacgagctttccgtc
atcaccaaaatgaagttccccggctacttcctcatcgtgtcggacttcatcaagtgggcc
aaggcccacgatatcccggtggggccggggcgtggatcgggcgccggctcgctggtggcc
tattcgctccagatcaccgacctcgatccgatccggttcggcctgctgttcgagcggttc
ctgaacccggaccgcgtgtccatgcccgacttcgacgtggacttctgccaggagcgccgc
gacgaggtgatccactacgtgcaggagcgctacggccgcgcccaggtggcgcagatcatc
acgttcggtacgctgcaggcgcgcggcgtgctccgggacgtgggccgcgtgctggagatg
ccctatgggcaggtggacaagctgtgcaagctggtgccgcagaacccggccaatccggtc
acactgaagcaggccatcgaggacgagccgcgcctccaggcctcccgcgaccaggaagag
gtggtcaagcgcgccttcgacatcgcggtgaggctggagggcctcaaccgccacgcctcc
acccatgccgcgggcatcgtgatcggcgacaggaagctccacgagctggtgccgctctat
cgcgatcccaagtccgacatgccggtcacccagtacaatatgaaatgggtggagcaggcg
ggcctggtgaagttcgacttcctgggcctgaagacgctgaccaccatcgacaaggcggtg
aagctgatccaccagcgcggcatcgatctggacatctccaagatcccgctggacgacccc
aagacctacgccatgttgggcaagggcgagacggtgggcgtgttccaggtggaaagcgcg
ggcatgcgccgggcgctggtggacatgaaggccgaccgggtcgaggacctgatcgccctc
gtggcgctctaccggcccggccccatggccaacatcccggtgtattgcgactgcaagcac
ggccgcgccaagccggactatctccatcccatgctggagccgtacctgaaggagacgttc
ggcgtcatcatctaccaggaacaggtgatgcagatcgcccaggccatggcgggttactcg
ctgggcgaggccgacctgctacgccgcgccatgggcaagaagatccgcgccgagatggag
aagcagcgcgagcgcttcgtctccggctccgctgggcggggcatcgagaaggcgcaggcc
gacaccatcttcgaccttctggccaagttcgccgactacggcttcaacaaatcccacgcc
gccgcctacgccatcgtcgcctaccagacggcctggctgaaggcgaactaccccaccgaa
ttcctcgccgcctccatgaccctcgacatgggcaacacggacaagctcgcggaattccgg
caggaggcccagcgcctcggcatcgaggtggtgccgcctaatatcaacctgtcggcccgc
gagttcgcggtgaaggacggcaagatcatctacgccatgtgcgccatcaagggcgtgggc
ggggcggccgtggacgcgctggtggcggcgcgcggtgaccggccgttccggagcttcgcg
gatttcgcctcgcgcctgccggtgaagctggtcaacaagcgcacgctggaaagcctgatg
gccgccggctgcttcgacgtgctggagaagaaccgcgcccgggcgtttgccgccatcgaa
tccatcgtggccgaggcccagcgcgtggaggcgaacgcccagtcgggccagaacgacatg
ttcggctccggcccctcggcggtctccctgcccattccggaggtggcgccctggctgccc
tcggagcggctgcagaaggaatatgacgccatcggcttcttcctcaccggccatccgctg
gacgattatgccgatgcgctgaagaagatgcgggtgcagtccttctcggacttctcccgc
gccgtgcgctcgggcgccgcggcggggcggctcgctgccaccgtggtctccaagcaggag
cggcggaccaagtccggcacccgcatgggcatcgtcggcctctccgacccctcgggccat
tacgaggcggtgattttctccgaaggcctcgcgcattatcgcgacctgctggagccgggc
acgccgctgctgatgatggtggcagccgagctgaacggcgaggatgtgcgcgtacgcatc
aattcctgcgagaagctggaccccgtcaccgcccgccaccagaagggcctgcgcatcttc
ctgcgctcccccgagcccatcgagggcatcgcccgccgcctcgccgacggcaagaccgtg
gatgcgggctccggcgaggtcagcctgatcctgatggtggaggatgcccgggccgaggtg
gaagtgagcctgcccggcaaatatcccatctcgccgcagatcgccggagccatcaaggcc
attccgggggtggtcgcgattgaatccgcatag
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