Xanthobacter versatilis: Xaut_4751
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Entry
Xaut_4751 CDS
T00581
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xau
Xanthobacter versatilis
Pathway
xau03410
Base excision repair
xau03430
Mismatch repair
xau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Xaut_4751
03430 Mismatch repair
Xaut_4751
03440 Homologous recombination
Xaut_4751
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xau03400
]
Xaut_4751
DNA repair and recombination proteins [BR:
xau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Xaut_4751
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Xaut_4751
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Xaut_4751
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
ATPgrasp_N
Motif
Other DBs
NCBI-ProteinID:
ABS69970
UniProt:
A7IPM4
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All DBs
Position
5274130..5276010
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AA seq
626 aa
AA seq
DB search
MSSCWWRRGGDRFRSLDARGCIWLDAPVNIALPNRLFLDVARSATGRTWRERLDVRGAQT
ALAMAQRTGISELLARVLAGRDVPLDGVEQYLDPSIRTLLPDPDTLTDMGAAVARLSRAV
TSGEQVAVFGDYDVDGACATALMVGVLRAAGLDPLFHIPDRIFEGYGPNVPAIEQLAARG
VTLLVTVDCGTTSMEPLAAARRLGMDTVVIDHHQSGERLPDAAAIVNPNREDDLSGLGHV
CAAGLAFITAVGLVRALRQNGHFNTARPAPDLLDTLDLVALATVADVVPLKGLNRAFVTK
GLLAMRRRGRIGLTALMDAARLDGPPRPFHLGFLIGPRINAGGRIGEATLGAKLLLTQDP
AEARQIAAELDRLNGERQEVERAILAAAEAEAEAALGLSDEGSVIVVSGDGWHPGVVGLV
ASRLKERFQRPAFAIAFNGETGTGSGRSLPGVDIGRAVRAALEAGLLVKGGGHAMAAGLT
VERARLGALRAAFEERLAADVARARAEGTLSIDGALTARGATTDLVEMVSRAGPFGAGNG
EPVFAFPGHRISYVESFGAGHVRARISSPDGTTLKATAFRCAEEPLGRALLAARGRPLHV
AGSLELDTWQGETRVALRMRDVAEPG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgtcctgctggtggcgcaggggtggtgatcgcttccggtcgctcgacgcgaggggc
tgcatctggcttgatgcgcccgtgaacatagccttgccgaatcgcctcttcctcgacgtc
gcccgttccgccaccggccgcacctggcgcgagcgcctggacgtgcgcggcgcccagacc
gccctcgccatggcccagcgcaccggcatcagcgagctgctggcccgcgtgctggccggc
cgcgacgtgccgctcgacggggtggagcaatatctcgacccctccatccgcacccttctg
ccggatcccgacaccctcactgacatgggcgccgccgtggcgcgcctgtcgcgcgcggtg
acgagcggcgagcaggtggcggtgttcggcgactatgacgtggacggcgcctgcgccacc
gccctcatggtgggcgtgctgcgggcggcgggcctcgatccactgttccacatccccgac
cgcatcttcgagggctatggccccaacgtgccggccatcgagcaactggcggcgcgcggc
gtcacgctgctggtgacggtggattgcggcaccacctccatggagccgctcgccgctgcc
cggcgcctcggcatggatacggtggtgatcgaccaccaccagtccggcgagcgcctgccg
gacgccgccgccatcgtgaaccccaaccgggaggacgacctctcgggcctcggccatgtg
tgcgcggcgggcctcgccttcatcaccgcggtggggctggtgcgggcgttgcgccagaac
ggccatttcaacaccgcccgcccggccccggacctgctggacaccctcgatctggtggcg
ctcgccaccgtggccgacgtggtgccgctgaagggcctcaaccgcgccttcgtcaccaag
ggcctccttgccatgcgccggcgcggccgcatcggcctcaccgcgctgatggacgcggcc
cggctcgacgggccgccacgcccgttccatctcggcttcctcatcggcccgcgcatcaat
gccggcgggcgcatcggcgaggcgacgctgggggcgaaattgctcctcacccaggacccg
gccgaggcccgccagatcgccgccgagctggaccggctcaacggcgaacggcaggaggtg
gagcgcgccatcctcgccgccgccgaggcggaggccgaggccgcgctgggcctcagcgac
gaaggctcggtgatcgtggtgagcggggatggctggcaccccggcgtcgtgggcctcgtg
gcgtcgcggctgaaggagcgcttccagcgccccgccttcgccatcgccttcaacggggag
accggcaccggctccggccgctcgctgcccggcgtcgacatcggccgggccgtgcgcgcg
gcgctggaggcaggactgctggtgaagggcggcggccatgccatggcggccggactcacg
gtggaacgcgcgcgcctcggtgccttgcgcgcagccttcgaggagcgcctcgccgccgac
gtggcgcgggcgcgggccgagggcacgctgtccatcgacggcgccctcaccgcgcggggg
gcgacgacggacctcgtcgagatggtctcccgcgccggcccgttcggcgccggcaatggg
gagccggtgttcgcctttcccggccatcgcatcagctatgtggagagctttggcgccggc
catgtgcgggcgcgcatctcatccccagacggcaccaccctgaaggccaccgccttccgc
tgcgccgaggagccgctcggccgcgccctgctggccgcgcgcgggcggcccctgcacgtg
gccggcagcctggaactggacacctggcagggcgagacccgcgtggcgctgcgcatgcgc
gacgtggccgagcccggctga
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