Xanthomonas euvesicatoria pv. citrumelo F1: XACM_0037
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Entry
XACM_0037 CDS
T01616
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xax03032
]
XACM_0037
03400 DNA repair and recombination proteins [BR:
xax03400
]
XACM_0037
Enzymes [BR:
xax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
XACM_0037
DNA replication proteins [BR:
xax03032
]
Prokaryotic type
DNA Topoisomerases
XACM_0037
DNA repair and recombination proteins [BR:
xax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
XACM_0037
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF7508
Motif
Other DBs
NCBI-ProteinID:
AEO40348
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All DBs
Position
45150..46427
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AA seq
425 aa
AA seq
DB search
MACAHGVVVALTQPSLAAANNRGQSLDLCAMKAKRVVRNAAVAVSTAGKLAAVATGAAVA
TAAVASAAAVAQAKATARAAGLTYVNDQQPGISRRKAGKSFSYRDADGQRIADADTLQRI
RSLAIPPAYTDVWICAKPNGHLQATGRDARRRKQYRYHADWAQVRGEGKFERVIAFGTAL
PKLRRRLRRDLVLPGFPREKVLAIVVALLADTLVRVGNAEYARSNRSYGLTTLRNRHMEF
LKGGRARLKFRGKSGQDHDIEVDDKQLVKLIRQCQQLPGQSLFQYRDDDGQLQPVDSGQV
NDYLREAMGEDFTAKDFRTWGGTLAALQRLARLPLPERSSERALKQVQNDVIREVADALG
NTPSVCRKAYIDPCVFEGWRAGQLQAMATGVRGERQWEAATLKFLSASRSRLKTQSTSAA
RRKSA
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcttgcgcacacggcgttgtcgtagcgttgacgcagcctagtcttgctgcggccaac
aatcgcggccagtccctcgacctgtgcgcaatgaaagccaaacgtgttgttcgcaatgcc
gcagtcgccgtcagtacggccggcaagctcgcggcggtcgccaccggcgccgccgtcgcc
acggccgctgtggcaagcgcagccgctgtggcgcaggccaaggcgaccgcgcgtgcggcc
gggctgacctatgtcaacgaccaacagccaggcatcagtcgccgcaaggccggcaagagc
ttcagttaccgcgatgccgacgggcaacgcatcgccgatgccgacaccttgcagcgcatc
cgttcgctggcgattccgccggcctataccgatgtgtggatctgcgccaagcccaatggc
cacctgcaggcgaccgggcgcgatgcgcggcggcgcaagcaataccgctatcacgccgac
tgggcgcaggtccgcggcgaaggcaagttcgaacgcgtgatcgccttcggtactgcgctg
cccaagttgcggcggcggttgcgtcgcgatctggtgctgccgggattcccacgcgaaaag
gtgctggcgatcgtggtggcgttgctggccgacaccctggtacgcgtcggcaatgccgaa
tacgcgcgcagcaatcgctcgtacgggctgaccacgctgcgcaaccggcacatggaattt
ctgaagggcggacgcgcgcggctgaaattccgtggcaagagcggccaggaccacgatatc
gaagtggacgacaagcaactggtcaaactgatccggcaatgccagcagctgccggggcag
tcgctgttccagtaccgcgacgacgatggccaattgcagccggtggattcggggcaggtc
aacgactatctgcgcgaggccatgggcgaagacttcaccgccaaggatttccgcacctgg
ggcggcacattggccgcgctgcaacgcctggcccggctgccgctgccggagcgcagcagc
gaacgtgcgctcaagcaagtgcagaacgatgtcatccgcgaagtggccgatgccttgggc
aacacgccctcggtgtgtcgcaaggcctacatcgacccatgcgtcttcgaaggctggcgt
gcgggccagctgcaggccatggcaaccggtgtgcgtggcgagcgccagtgggaagcggcc
acgctgaagtttttgagcgcttcgcgcagcaggctcaagacgcagtcgacgtctgcggca
aggcgcaagtcggcgtaa
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