Xanthomonas euvesicatoria pv. citrumelo F1: XACM_0635
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Entry
XACM_0635 CDS
T01616
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
Pathway
xax00300
Lysine biosynthesis
xax00470
D-Amino acid metabolism
xax01100
Metabolic pathways
xax01110
Biosynthesis of secondary metabolites
xax01120
Microbial metabolism in diverse environments
xax01230
Biosynthesis of amino acids
Module
xax_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XACM_0635 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XACM_0635 (dapF)
Enzymes [BR:
xax01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
XACM_0635 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AEO40940
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Position
727524..728378
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AA seq
284 aa
AA seq
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MSADGRSGRLRFTKMHGAGNDFVVLDLRDGTPPPDAALAAQLADRHFGVGCDQILTIEAP
RSQGAVAAYGIWNSDGSAARQCGNGARCVAAWLVRDGTAQGERFIIDSPMSAHAVERLDG
DRYAVAMGVPQFEPAQIPLAGFAHARDEYALPVHGETVRFGAVSMGNPHAVVEVGRVDAA
PVERVGALLQQNAAFPDSVNVGFVQVVDPAHVRLRVFERGVGETLACGSGACAAAVVLMQ
RGRVERDVQVSLPGGELRIRWPGDQEQVVMSGPAVFVFDGEWNR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacggtcgcagcgggcgtctgcgtttcaccaaaatgcatggcgccggcaac
gacttcgtggtgctggacctgcgcgacggtacgccgccaccggatgccgcactggcggcg
cagctggccgaccgccacttcggggtgggctgcgatcagatcctgaccatcgaggcaccg
cgcagccaaggtgccgtggcggcctacggcatctggaattccgatggctcggccgcacgc
caatgcggcaacggcgcacgctgtgtcgccgcgtggctggtgcgcgacggcacggcccag
ggcgagcgcttcatcatcgacagcccaatgtccgcgcacgcggtcgagcgcctcgacggc
gaccgctacgcggtggcgatgggtgtcccgcagttcgagcccgcccagattccgctggcc
gggtttgcacatgcgcgcgacgaatatgcgctgccggtgcacggcgagaccgtgcgcttt
ggcgcggtgtcgatgggcaacccgcacgcggtggtcgaagtcggtcgcgtcgatgcagca
ccggtggaacgcgtaggcgcgctgctgcagcagaacgcggcgtttcccgattcggtcaat
gtgggtttcgtgcaggtggtcgaccccgcgcatgtgcgcctgcgcgtgttcgagcgcggg
gtgggcgaaacgctggcctgtgggagtggcgcctgtgcggccgcggtggtgttgatgcaa
cgcggccgtgtcgagcgcgatgtgcaggtgtccttgcccggtggcgagttacgcattcgt
tggcccggcgaccaggagcaggtggtcatgtccggcccggcggtgttcgtcttcgatgga
gaatggaaccgatga
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