Xanthomonas euvesicatoria pv. citrumelo F1: XACM_1312
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Entry
XACM_1312 CDS
T01616
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xax03009
]
XACM_1312 (rumA)
Enzymes [BR:
xax01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
XACM_1312 (rumA)
Ribosome biogenesis [BR:
xax03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XACM_1312 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
PCMT
MTS
RrnaAD
Methyltr_RsmB-F
Methyltransf_11
Cons_hypoth95
TRAM
TRM5-TYW2_MTfase
Methyltransf_23
Methyltransf_15
Methyltransf_12
UPF0020
PrmA
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
AEO41596
LinkDB
All DBs
Position
1478119..1479453
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AA seq
444 aa
AA seq
DB search
MARTRNRLDRTPFQTAVTDLSHDGRGVARRDGEGGKVTFISGALPGELVRAEPTARSRHF
DEAKTVEVLEASPQRVTPRCPHFGVCAGCVLQHLEESQQIVAKQRVLMDNLERIGHVTPQ
AVLPALTGDNWGYRRKGRFSVRRVEKKDKTLVGFRELDPRFVADLSICYTVIPQIGEKIS
LLAALIEGMDGKRDIPQIEFIAGDDAVALTIRHMQPLSERDRQAWVAFAQEHGFAIFLQP
GGVDSVHPLWPQDVPLSFRLPQWEVELAFRPLDFIQVNASLNQKMIAHAVALLEAKPDDR
VLDLFCGLGNFTLPLARVVREVVGVEGDAGLVARAKENAQRNGLDNAQFHAADLTQDQRS
APWMRQGFDKLLLDPPRSGALEVLQQLPLKTFDRIVYVSCHPGSLARDAGYLVNEQGFTL
VSAGAMDMFPHTAHVESIAVFERR
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
gtggccagaaccagaaaccgtctcgaccgtacccccttccagaccgcggtcaccgacctg
agccatgacggccgcggggtcgcccgccgcgacggcgagggcggcaaggtcaccttcatc
agcggcgccttgccgggcgagttggtgcgcgccgaacccaccgcccgtagccggcatttc
gatgaggccaagaccgtggaggtgctggaggcctcgccgcagcgggtcaccccgcgctgc
ccgcactttggcgtctgcgcgggctgcgtgttgcagcatctggaggagtcgcagcagatc
gtggccaaacagcgcgtgctgatggacaacctggaacgtatcggtcacgtcactccgcaa
gccgtgctgcccgcgctgaccggcgacaactgggggtatcggcgcaagggcaggttctcg
gtgcgtcgcgtcgagaagaaggacaagaccttggtcggctttcgtgagctggacccgcgg
ttcgtggccgatctgtcgatctgctacacggtgattccgcagatcggcgagaagatctcc
ttgcttgccgcgctgatcgaaggcatggacggcaagcgcgacattccgcagatcgaattc
atcgccggcgacgatgcggtggccttgaccattcggcatatgcagccgctcagcgagcgc
gatcgccaggcctgggtcgcctttgcccaggagcacggctttgcgattttcctgcagccc
ggcggggtggacagcgtgcatccgctgtggccgcaggacgtgccgctatcgttccgcttg
ccgcagtgggaggtggaactggcgttccggccgctggatttcattcaagtcaacgcgtcg
ctcaatcagaagatgatcgcccatgcggttgcgctgctggaggccaagcccgacgaccgc
gtgctggacctgttctgcggcctgggcaacttcaccctgccgctggcgcgcgtggtgcgt
gaggtggtgggggtggaaggcgacgccggacttgtggcacgggccaaagagaacgcccag
cgcaatggcctggacaatgcgcagttccacgccgccgacctgacccaggatcagcgcagc
gcaccctggatgcgccagggctttgacaagctgctgctggacccgccgcgctccggcgcc
ctggaagtgctgcagcagttgccgttgaaaacgttcgatcgcatcgtctatgtgagctgc
cacccgggctcgctggcgcgcgacgccggctatctggtcaacgagcagggcttcacgctg
gtttcggcaggcgcgatggacatgttcccgcacaccgcgcacgtggaaagcatcgcggtg
tttgagaggcggtga
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