Xanthomonas euvesicatoria pv. citrumelo F1: XACM_1902
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Entry
XACM_1902 CDS
T01616
Symbol
rpfB
Name
(GenBank) long-chain fatty acyl CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
Pathway
xax00061
Fatty acid biosynthesis
xax00071
Fatty acid degradation
xax01100
Metabolic pathways
xax01212
Fatty acid metabolism
xax02024
Quorum sensing
xax04146
Peroxisome
Module
xax_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
XACM_1902 (rpfB)
00071 Fatty acid degradation
XACM_1902 (rpfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
XACM_1902 (rpfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
XACM_1902 (rpfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
xax01004
]
XACM_1902 (rpfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
xax04147
]
XACM_1902 (rpfB)
Enzymes [BR:
xax01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
XACM_1902 (rpfB)
Lipid biosynthesis proteins [BR:
xax01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
XACM_1902 (rpfB)
Exosome [BR:
xax04147
]
Exosomal proteins
Exosomal proteins of breast milk
XACM_1902 (rpfB)
Exosomal proteins of breast cancer cells
XACM_1902 (rpfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AEO42176
LinkDB
All DBs
Position
complement(2144939..2146621)
Genome browser
AA seq
560 aa
AA seq
DB search
MNQARPWLQSYPAGVAAEIDLEQFRTVAEVFATSVKRFADRPAYHSFGKTITYREADQLV
EQFAAYLLGELQLKKGDRVALMMPNCLQYPIATFGVLRAGLTVVNVNPLYTPRELKHQLI
DSGASVLVVIDNFGTTVQQVIADTPVRQVITTGLGDMLGFPKAALLNFVVKYVKKLVPDY
RINGAIRFREALALGRKHRVPTLQIEPDDIAFLQYTGGTTGVAKGAMPTHRNLVANMQQV
HQWLAGTGKLEEGHEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELK
KTRFTAFTGVNTLFNGLLNTPGFDQVDFSSLKMTLGGGMAVQRSVAERWKKVTGLTLVEA
YGLTETSPAACINPMDLKDYNGSIGLPIPSTDACIKDDAGAELPVGEIGELCIRGPQVMK
GYWKKPDETAKVMDAQGWLHTGDIARMDAQGFVYIVDRKKDMILVSGFNVYPNEIEDVIA
EMPGVLEVAAVGVPDDKSGEIVKAVIVKKDPALTADDVKAHCRANLTGYKQPRVIEFRKE
LPKTNVGKILRRELRDAPKT
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaggcacgtccttggttgcaaagttatccggccggcgttgccgccgaaatcgat
cttgagcagttccgcacggtggccgaggtgtttgccacctccgtgaaacgcttcgccgac
cggcctgcgtaccatagcttcggcaagaccatcacctaccgcgaggcggatcagctggtc
gagcaattcgccgcctacctgcttggcgagctgcagttgaagaaaggcgaccgcgtcgcc
ttgatgatgcccaactgcctgcaataccccatcgcgaccttcggcgtgctgcgtgccggc
ctgaccgtggtcaacgtcaatccgctgtacaccccgcgcgaactcaagcatcagttgatc
gactccggcgccagcgtgctggtggtcatcgacaacttcggcaccaccgtgcagcaggtc
atcgccgacacgccggtcaggcaagtcatcaccaccggcctgggcgacatgctgggcttc
ccgaaggcggcactgctcaacttcgtggtcaagtacgtcaagaagctggtgcccgattac
cgcatcaatggcgcgattcgcttccgcgaggcgctggcgctgggccgcaagcaccgcgtg
ccgacgctgcagatcgaacccgacgacatcgctttcctgcagtacaccggcggcaccacc
ggcgtggccaagggcgcaatgccgacccaccgcaatctggtcgccaacatgcagcaggtg
caccagtggctggcgggtaccggcaagctggaagaaggccacgaagtggtgatcaccgcg
ctgccgctgtaccacatcttcgcattgaccgcgaacggcctggtcttcatgaagatcggc
ggctgcaaccacctgatcagcaacccgcgcgacatgccaggcttcgtcaaggagctgaaa
aagacccgcttcaccgcgttcaccggcgtcaacacgctgttcaacgggctgctcaatacg
cccggattcgatcaggtggatttctcctcgctcaagatgacccttggcggcggcatggcc
gtccagcgttcggtcgccgagcgttggaagaaagtcaccggcctgaccctggtcgaagcc
tacggcctgactgaaacctcgccggccgcgtgcatcaacccgatggacctgaaggactac
aacggttcgatcggcctgccgattccgtccaccgatgcctgcatcaaggacgacgccggc
gcggaactgcccgtgggcgagatcggcgagctgtgcatcaggggcccgcaggtcatgaag
ggctactggaagaaacccgatgaaaccgccaaggtcatggatgcccaaggctggctgcat
accggcgacatcgcgcgcatggacgcacagggcttcgtctacatcgtcgatcgcaagaag
gacatgatcctggtgtccggcttcaacgtgtaccccaacgagatcgaggacgtgatcgcc
gaaatgcccggcgtgctggaagtggccgccgtgggcgtgccggatgacaagtccggcgag
atcgtcaaggcggtcatcgtgaagaaggacccggccctgacggccgatgatgtgaaggcg
cattgccgcgctaacctcaccggctacaagcagccgcgggtgatcgaattccgcaaggag
ttgcccaagaccaacgtcggcaagatcctgcgccgcgaattacgggacgcgccgaagacg
taa
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