Xanthomonas euvesicatoria pv. citrumelo F1: XACM_3386
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Entry
XACM_3386 CDS
T01616
Name
(GenBank) RTX toxins and related Ca2+-binding protein
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
HCBP_related
Lipase_3
RTX_C
Borealin
AXE1
Motif
Other DBs
NCBI-ProteinID:
AEO43633
LinkDB
All DBs
Position
complement(3931036..3937815)
Genome browser
AA seq
2259 aa
AA seq
DB search
MEMEFSNIILDYAQLAANVYGSKSSVRSELNTVQLPEGWSQIDEKISQSGFMARAYRNAA
TGEVVVAYAGTTLEEGQALDDWITGNVPAGVGGFSQQVFEAIEFYLNVLSLPVVDSAKTS
FTGHSLGGGLASLMAVYFDKKATVFDQAPFEKSAATSTYDLYLEPLKYAGYTLPQEFKDY
DLLHYNERKSNVQQIVVAGEVLSYGTENLFKINDGNPLVLDPEAEDIFGWGGSVAADFAK
AVDLHSMTLLAGFMNSEIFLEASKNFKELLPRVFRGAYQNVVPTNRTASTLLELLVQRQI
VGEGALDTLAADVAKIVGTELRGTDSLFFVNENGDDKQLNLAAALIDVVLAGLYQQANGR
RPQQGFTRLLADVLIRADGYLGFDAETLGDERKRGVDSLSQYVSARTQNLALDTNLLERA
RWGVQDGAAMHYVGSDFDVRSDVVVALHGNNTIAVGGGDDLVLGGNGDDDISGGSGDDLL
YGGAGFDTYRFLTNESLLVSTDRIYDSGGDGAVYVDNVAVTAGVRLTETTWVDSTGNLRL
TMIADPVHRLIITNLVSGDTIHVERWQNGQLGISLGGEIGVLPPSGTKWDGDLTPEVANI
NGVFQGTDEAEAFYTGFGTDTIDGGGGIDVINGGSGSDIINGGDGNDFIVEVARTARNLD
RWIGAPPTDRMLASGVGFMVGLRSGDAEDARTYYEDIFLGLVGTIRDGGPSFYPDPELFA
DSGDVIDGGGGSDLIMSGEGNDVVDGGIGNDVISGGHDNDILLGNDGDDLIFGDQINGVL
AGEEVANLSSVARADGDDIIDGGAGNDELRGDGGSDQIWGGEDDDVILGDTVGMDTSRQG
NDSLYGGEGSDQIWGGGGNDTISGDAGNDIIYGDFVVGQLDLQFHGADRISGGAGMDWIN
GQGGDDVIDGGDDADTLLGGAGSDVINGGAGYDLIVGDDSDAPESEQGNDTIEGGSGDDT
ILGMGGNDQLAGGEGNDGLYGDDQVGNLAGNDKLSGNAGDDYLDGGRGDDQLDGGTGNDI
LIGAEGNDTYVIRAGDGHDVVSGLGNQWAGSDTIALTGLSRSQATFRRSGSALVMTFGTD
QSVRLEGFLARDSGGHRIVFGDGSTMDRANALSLLGGGTAGDDELQGSDQDDELYGEAGN
DRIYGQEGNDSLNGGIGNDLVFGGGGNDLLEGGDGNDLLDGGAGDDRLSGGAGSDVFRYG
TGYGNDIIAFDPAADVRQVQLLDIVRPADMYYALKNGALIMTDNDTGHSLTIEWYAGANG
ATARILLADGSELLPEMLWRGADEIEGNSWNDEIYGYDGDDLLVGMLGDDTIYGGNGQDT
LIGDFLHIYYYWQMGVWYNDYLDGGEGDDYIYGNGGDDILIGGAGNDSLYGGLGADILNG
GAGNDVLYGGPGADIYEFGRGGGSDFILGSPGWHGSVRFDASVLKEDIVVYNDDIYGGSL
QLIIEGASDSITLGGFYDIQSPGIPTLDPIEQVIFADGTVWDVQEILYQSMRGSHRNDNI
IIFYPKDEFIDSGLGNDIVQGLENDDTIYGGAGNDSLSGGAGNDILVGGSGSDILSGGAG
NDIYRFGVGSGLDFISNWRTDEPDHDLIELGEGITTENIHLARSGDALVIDIEGYTDRLM
VLGHFLTAEQWGSGGPIDALHFADGSIWGQDEILEKLGAPLEPIEVRIGDSSYTNFYDTG
GYVIGIQSTARDYNFETAGATWFDLGPGDVHISGGKAGDTYVFGKGYGIQAIQDHGGTDR
IILNADLSPSDFTLYKLGDDLQMYVEGQSPLTIVGFFNESGVAAIESMVFANGTVWDSAW
LHANAVNPNVTLNGTASSDILRGSIGNDQLIGLDGNDLLEGESGDDLLDGGTGADVMRGG
MGSDTYVVDDAGDSIFDNGYNSGLEDFWRTDINTVISSIDYTLGINLQQLILDGTADLNG
TGNAESNSLQGNGGANILTGAAVDDYSSNADWMDGGGGNDTLIGAWGDDTLIGGTGNDRM
EGGGGDDLYYVDSLGDVIVETEGEAPSIPMAMAMQLSSDATTFSTGMSGAPGIPAMGQHP
YRNGDTVAASIDFTLIDELESLILVGNAVNGTGNEFRNWLKGNAQDNVLSGLGGSDTVSG
GAGRDVLYGGDGGDDLDGNDGDDTLVGGDGDDLYVYTAGQGHDTIVNIDVYGEDMLQVNG
AGFDQFSFARAGDDMVATLNDQSGSLTFKDWYTDTANRVDRLYDQNWTGLNADQVDSLVG
GAELSQLIGAMSQGETGQEFYAQAWSERGNQPNVMIAAV
NT seq
6780 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaattcagtaatataattcttgattatgcgcagctggccgcgaatgtctat
ggatcgaagtccagtgtgaggtcggaactgaatactgttcagctccccgaaggatggagc
cagatcgacgagaagatctcgcagagcggattcatggctagggcctatcgcaatgcagcc
acgggggaggtagtggtcgcttatgcagggacgacgctagaagaaggtcaagcgctcgat
gactggatcacgggaaatgtaccagcaggcgtaggcgggttctcccaacaggtcttcgaa
gccatagagttctatctgaatgtactgagcttgccggtcgtggactcagcgaagactagt
ttcaccggtcattcgctaggtggcgggctcgcttcgttgatggcggtttatttcgataaa
aaagcgactgtcttcgatcaggcgcctttcgagaagtcggcggcaacgtctacatacgac
ctgtatctggaaccattgaagtacgcaggctatacccttcctcaggaatttaaagactac
gatctgctccattacaacgagcggaaatcgaacgtgcaacagattgtggtggcgggcgag
gtactcagctatggcactgaaaatttgttcaagatcaatgatggaaatccgcttgtgctc
gatccggaagcggaagatatctttggctggggcggaagcgtagcggctgacttcgccaag
gcagtcgacctgcattcgatgacactgcttgctgggttcatgaattcggaaatatttctt
gaggcctccaagaatttcaaagagttgctgccaagagtatttcggggggcatatcaaaat
gttgtgccgacaaatcgtactgctagtactttgcttgaattgctggtccagcgccagatc
gtaggagaaggcgcgctcgacacgctcgcggccgacgtggcgaagatcgtgggtaccgaa
ctgcgcggcacggatagtttgttttttgtcaatgaaaacggagacgacaagcagctcaat
ctggccgctgcgctcatcgatgtcgtgttggcggggctctatcaacaggccaatggcagg
cggccgcagcaaggatttactcgcctgcttgccgacgtcctgatccgcgctgacggctat
ctcggtttcgatgcggagactcttggcgatgaacggaagcgaggcgtcgactcactcagc
caatatgtctctgcaagaacacaaaaccttgccctcgatacgaatcttctggagcgcgcg
cgctggggcgttcaggatggtgctgccatgcactatgtcggctccgatttcgacgtgcgc
tcggacgtggtggtggctctacacggcaacaacaccatcgcagttggtggcggcgacgat
ctggtcctgggcggcaacggcgacgacgatatcagtggtggatcgggcgatgatctcctg
tacggtggcgcaggattcgacacgtaccgctttcttaccaacgaatcccttctagtcagt
acagatcgcatttacgacagcggcggcgatggcgctgtgtatgtcgacaacgtagcagtg
acggcaggtgtccgcctgacggagacgacgtgggtcgattccaccggtaacttgcgattg
accatgattgcggacccggtccatagattaataatcaccaatttggtcagcggcgacacg
atccatgtcgagcggtggcagaacggtcagttggggatttctctgggtggggaaattggt
gttctcccaccgtcggggacaaagtgggacggcgatctgacgcctgaagtcgccaacatc
aacggcgtttttcaaggaactgacgaggccgaagcgttctacaccggcttcggcaccgat
accatcgacggtggtggcggtatcgatgtcatcaacggtgggtctggtagcgacatcatc
aacggcggtgatggcaacgatttcatcgtcgaagttgccaggacggcgcgcaatctggac
cgctggattggggctccgcctaccgacaggatgttggccagtggtgtgggtttcatggtt
ggtctgcgtagcggcgacgcagaggatgcgcgtacctattatgaagacatctttctggga
ttggtcggcaccattcgggacggtgggccgtcgttctatcccgatccggaattatttgcc
gatagtggcgacgtcatcgacggcggtggcggttcggatctgatcatgagcggcgaaggt
aacgatgttgtcgacggcggcatcggcaacgacgtgatctccggcgggcatgataacgac
attctgttgggtaatgacggcgatgacctgatcttcggagaccagatcaacggtgtcctc
gcaggcgaagaggttgccaatctgtcgtccgtagcgcgcgcggacggcgacgacatcatc
gatggcggtgccggtaacgacgagttgcggggcgacggtggtagcgaccagatatggggg
ggcgaggatgacgacgtcattcttggggacaccgtgggaatggacacatcgcgccagggc
aacgatagcttgtatggcggtgagggcagtgatcagatctggggtggtggcggcaacgac
accatttccggcgatgcgggcaacgacatcatctacggcgacttcgtggttgggcagctg
gatctgcaatttcacggtgctgatcgcatcagcggcggtgccggcatggactggatcaat
ggacaaggcggcgatgatgtcatcgatggtggcgatgatgccgataccttgctcgggggc
gctgggtcagacgtcatcaacggtggcgcaggctatgacctgattgtcggcgatgattcc
gatgccccggaaagcgagcagggcaacgatacgatcgaaggcggttcgggagatgacacg
attctcggcatgggcggcaacgatcagttagccggcggcgaaggcaatgacggcctctac
ggcgacgatcaggttggcaatttggccggaaacgacaagctctccggcaacgcgggcgac
gattacctagacggtggccggggggacgaccaacttgatggcggcactggcaacgacatc
ctcatcggcgcagaaggaaacgatacctacgtcatcagggctggcgacggtcatgatgta
gtgagcggcttgggtaatcagtgggcagggagcgacaccatcgcgctaactggcttgtct
aggagtcaggcgacgttccggcgcagcggaagtgcgctggtgatgacatttggtacagat
cagtcggttcgcctggaaggctttcttgcacgcgacagtggcgggcaccggatcgtcttt
ggcgatggttcgacgatggatcgggctaatgctctgagcttacttggtggtggtactgcg
ggtgatgacgagttgcaaggcagcgaccaagacgacgaactgtatggcgaggctggtaac
gacagaatttacggccaagaaggcaatgattcgctcaatggcggaatcggcaacgatctt
gtattcggagggggcggaaacgacctgctcgaaggtggcgatggcaacgatcttctcgac
ggcggagccggcgacgaccgtctgtccggcggagcgggctccgacgttttccgctacggc
actggctacggcaatgacatcattgcgttcgatcctgctgccgatgttcggcaagtacag
ctactcgatatcgtcaggcccgccgatatgtattacgcgctcaagaatggcgcgctaata
atgacagataacgatactggccatagcctcaccattgagtggtacgctggtgccaatgga
gcgactgcacgtatcttgctggccgacggcagcgagcttttgccagaaatgttgtggcgc
ggcgcggatgagatcgaaggaaattcgtggaacgatgaaatttatgggtatgacggtgat
gatcttctagttggaatgctgggggacgatacaatttatggtggcaatggccaggatact
ttgataggggattttctccacatttattattattggcagatgggggtgtggtataacgat
tatctggatggcggggaaggtgatgactatatttacggaaatggcggtgatgacattctg
ataggtggtgcaggcaatgactcactctatggaggactaggcgcggatattctgaatggt
ggagccggtaatgacgtgctctatggaggtccgggggcagatatctacgagtttggccgt
ggtggcggtagcgacttcatcctgggatcgcctggttggcacgggagtgttaggtttgat
gccagtgtactgaaggaagatattgtcgtttataacgatgatatttatgggggttctttg
caactcatcattgagggggccagtgactcaattacattgggaggattttacgacatacaa
tcccccgggatccctacgcttgatcctatcgagcaggtcatattcgccgatggcactgtt
tgggatgtgcaagaaatattatatcaatccatgcgggggtcgcaccgtaacgacaatatt
ataattttttatccaaaggatgaatttatcgattccggtttgggtaacgatattgtccaa
gggttggagaacgacgacaccatctatggtggtgccggaaatgacagcttgtcgggtggt
gcgggtaatgatattttggtgggaggcagcggttcggatattctcagcggcggtgctgga
aacgatatttatcgcttcggcgttggctcgggactggacttcattagtaattggcgaaca
gatgagcccgatcacgatttgattgagcttggcgaaggaattaccacggaaaacatccac
ctcgcgcgttcgggtgatgccttggtaatcgatatcgagggctacaccgaccggttgatg
gtgttgggccactttctgacggccgagcaatggggcagtggaggcccgatcgatgcgttg
cacttcgccgatggcagcatttggggccaagatgagattctggaaaaacttggtgcacct
ctcgagcctatcgaagtcagaattggcgattcgagctataccaatttttatgatactggc
ggctacgtcatcggcattcagagtactgcgcgcgattataattttgaaacggcaggagcc
acctggttcgacctcgggccaggtgatgtacacatttctggcggtaaagccggggatacc
tacgtgttcggcaagggctatggaatccaggcaatacaagaccacggcggaacggaccgg
ataattctcaacgctgacctgtcccctagcgattttaccctctacaagctgggcgatgac
ttgcagatgtatgtggaggggcagtcgccgctcaccatcgttggatttttcaatgagagc
ggagtggcagcgattgaatcgatggtcttcgccaacggaaccgtctgggattccgcatgg
ctgcatgccaatgctgtgaacccgaacgtgaccttgaacggaactgcgtccagcgacatc
ctgcgtggaagcatcggcaatgatcagctaattgggctggatggtaacgacctattggaa
ggcgaaagcggtgacgatctgctcgacggtggaaccggcgcggatgtgatgcgtggcggc
atgggaagcgatacttacgtggtggatgatgctggtgactcgatctttgataatggatac
aacagtggattggaagacttttggcgaacagatatcaatacggtaatcagcagtattgac
tacacgctgggcatcaacttgcagcagttgatccttgatgggactgccgatctcaacgga
acaggcaatgcagaatccaacagtctgcaggggaacggtggagctaacatcctgaccggg
gcggctgtggacgattactcttctaatgccgactggatggacggtggaggaggaaatgat
acgttgatcggtgcgtggggtgacgacacgctgatcggcggtacgggcaatgatcgcatg
gagggcggtggaggtgacgatctttattatgttgatagtcttggtgatgtcatcgtcgaa
accgagggcgaggccccttcaatccccatggcaatggcgatgcagttgtctagcgacgca
acgacattctctaccgggatgtcaggagcgcccggcattcccgcgatgggccaacatcct
tatcgcaatggtgacacggtagctgccagcatcgacttcactttgattgatgagctggag
tcgctgattctggtcggtaatgccgtaaatggtactgggaatgagttccgcaattggctg
aaggggaatgcacaagacaacgtgctgagcggtcttgggggctctgacacggtctccggc
ggtgccggccgcgacgttttgtacggtggcgatggtggtgatgatttggatggcaacgat
ggagacgacacgctggttggcggcgacggcgatgacctttacgtctataccgctggccaa
ggccacgacaccatcgtgaatatcgatgtttatggcgaagatatgttgcaggtgaacggg
gcaggcttcgaccagttcagcttcgctcgagcgggcgatgacatggttgcaacactgaac
gaccaatccggtagtttgacgttcaaggactggtatacggatacggccaaccgtgtcgac
cgtctctacgaccagaactggacgggactcaatgccgatcaggtggacagcttggtcggt
ggtgcggaattgagtcagctgatcggtgcgatgtcccagggcgagacaggccaagagttc
tatgcgcaagcatggagcgaacgcggcaatcagccgaatgtgatgattgctgcggtctga
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integrated database retrieval system
