Xanthomonas euvesicatoria pv. citrumelo F1: XACM_3402
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Entry
XACM_3402 CDS
T01616
Name
(GenBank) rhamnogalacturonase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XACM_3402
Enzymes [BR:
xax01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
XACM_3402
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
EMC7_beta-sandw
PapC_N
Motif
Other DBs
NCBI-ProteinID:
AEO43649
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Position
3953616..3955217
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AA seq
533 aa
AA seq
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MPRNLRHYFACALLLYAGISAPALADFGISRSGNRVIVDSGAELVFAVDARNGDIVSMRY
RDNELQTTESKGSHIASGLGSASVDARIVGGTIVVSAKAGDLVQYYIARKGRNAIYMATD
APTLLPVGELRFVARLNVSKLPNAQQEPDSNVGRAIESEDVFLLPDGRTSSKFYSARRMM
DDQVHGVSGPGVAVFMLMGNRERSAGGPFFKDIATQKTSLTHELYNYMYSDHTQTEAFRG
GLHGVYGLLFTDGSLPSSAQLDTAFVDATLGLSGYLPASGRGTVSGHVGGVLPGQPAVIG
LRNAQAQYWATADGSGNYQVTGVRPGSYRMTLYQNELELAQRNIEVSAGATAHAALQAVV
LPGTVKWQIGIPDGTPVGFSDADLLPRAHPSDARMHWSAVTYTVGSSSVSSFPAVQWRGI
NTPSRIDFTLPANEVRGYRLRLFVPLAQGGARPQISVNARWNGPLPAAPTQPKTRGITRG
TARGNNTLYEVDIPASALQAGNNRIEIGMASGSPDNGYLSPAIVFDSIQLVAL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaatcttcgacattacttcgcctgcgcactgctgctctatgccggcatcagc
gcacctgcactggccgacttcgggatcagccgcagcggcaaccgcgtgatcgtcgacagc
ggcgccgagctggtgtttgcggtcgatgcccgaaatggcgacatcgtgtcgatgcgctat
cgcgacaacgaactgcagaccaccgaatcgaagggctcgcacatcgcttcggggttgggc
agtgccagtgtggatgcacgcatcgttggcgggacgatcgtggtgtcggccaaggccggc
gacttggtccagtactacatcgcacgcaagggccgcaacgcgatctacatggccaccgat
gcgcccaccttgctgccagtgggcgaattgcgcttcgtcgcccgcttgaacgtgtccaag
ttgcccaatgcgcagcaggagcccgattccaatgtcggcagagcgatcgaaagtgaggat
gtctttctattgccggatgggcgcaccagctccaagttctattctgcacgtcgaatgatg
gacgaccaggtgcatggcgtcagtggccctggcgttgccgtgttcatgctgatgggcaac
cgcgagcgcagcgcgggcggcccgttcttcaaggacattgcgacgcaaaaaaccagcctg
acgcatgagctctataactacatgtattccgatcacacccagaccgaagcctttcgcggc
ggcctgcacggggtgtacgggctgctgttcaccgatggaagcttgccgtcgagtgcgcag
ctggacaccgcgttcgtcgatgccacgctgggcctgagcggttatttgccggcaagcggg
cgcggcaccgtgagtgggcacgtcggcggcgtgctgccgggccagccggccgtcatcggc
ctgcgcaacgcgcaggcgcagtactgggccaccgccgacggcagcgggaactaccaggtg
acgggtgttcgcccgggcagctatcgcatgacgctctaccaaaacgaactggagctcgca
caacgcaacatcgaggtttctgccggtgccactgcgcacgccgcactgcaggcggtcgtt
ttgccgggcacggtgaagtggcagatcggcattcccgacggcacgccggtggggttcagc
gacgcggacctgctgccgcgggcgcacccttccgatgcgcgcatgcactggtctgcggtg
acctacaccgtgggatcgagcagcgtgagcagctttccggcagtgcagtggcgcggcatc
aacaccccgagccggatcgacttcaccctgcccgccaacgaggtgcgcggctatcgcctg
cgtcttttcgtgccgttggcacagggcggcgcacgtccgcagatcagcgtgaacgcacgc
tggaacggcccgctgcctgccgcgcccacgcaaccaaagacacgcggcatcacgcgcggc
actgcgcgcggcaacaataccctttacgaagtggacatccctgcctcggccttgcaggcc
ggcaacaaccgcatcgagatcggcatggcctccggctccccggataacggctacctcagc
ccggcaatcgtgttcgacagcatccagctggtggcgttatag
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