Xanthomonas euvesicatoria pv. citrumelo F1: XACM_3601
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Entry
XACM_3601 CDS
T01616
Name
(GenBank) uracil DNA glycosylase superfamily protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
Pathway
xax03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
XACM_3601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xax03400
]
XACM_3601
Enzymes [BR:
xax01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
XACM_3601
DNA repair and recombination proteins [BR:
xax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
XACM_3601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
DUF2026
Rab3-GTPase_cat
Motif
Other DBs
NCBI-ProteinID:
AEO43846
LinkDB
All DBs
Position
complement(4185453..4186889)
Genome browser
AA seq
478 aa
AA seq
DB search
MFSAEVEPPWSFEAWRALARAGWCAQVEPDDVAWNGGAQGGLLMGQGLLALPAVVPPPRV
SADFMQLAASVLCHRDPQRHAVLYRLLWRVASGEKALLERATDVDVHRLRQWQKAVQRDT
HKMKAFVRFRRLPGEEEDFVSWFEPEHWIVDRVAPFFARRFAGMRWAILTPYRSVRWDGQ
ALAFGEGAVRTQVPADDAQETLWRTYYAHIFNPARLNPTMMRQEMPQKYWKNLPEATLLP
ELIREAGVRVREMAERAPEPVRRRVPAAPAPLPDVVTQSLAQLRTAARDCRRCELWQPAT
QTVFGEGPDDASVMVIGEQPGDEEDLSGRPFVGPAGRLFNMALGELGVDREKFYVTNAVK
HFRFEQRGKRRLHRNPERTHVQACSGWLQAERAQLRPAQIVCLGATAAQAVLGSSFRLMR
ERGQWQRLDDGTPVLTTVHPSWVLRQPSTDAREEGYRGFVEDLRRLLDPPPPSSDQSR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcgctgaggtggagccgccgtggagctttgaggcgtggcgcgcgttggcgcgg
gcgggctggtgcgcgcaggtggagccggacgatgtggcctggaatggcggggcgcagggc
ggcttgttgatggggcagggcctgttggccttgccggctgtggtgccaccaccacgggtc
tctgcggatttcatgcagctggcggcctcggtgctgtgtcaccgcgacccgcaacggcat
gccgtgttgtatcgcttgctgtggcgcgttgcctctggagaaaaagccttgctggagcgc
gccaccgatgtggatgtgcaccggctacggcagtggcaaaaagcggtgcagcgcgatacg
cacaagatgaaggccttcgtgcgctttcgccgcctgcccggggaagaagaagacttcgtg
tcctggttcgagcccgagcactggatcgtggatcgcgtggcgccgttttttgcgcgtcgg
tttgccggcatgcgctgggcgatcctgaccccgtaccgcagcgtgcgttgggatgggcag
gcgttggcctttggcgaaggcgcggtgcgcacccaggtcccggccgacgatgcgcaggag
acgctctggcgcacgtactacgcgcatatcttcaacccggcgcggctcaacccgaccatg
atgcggcaggaaatgccgcagaaatattggaagaacctgcccgaagccacgctgttgccg
gagctgatccgcgaagccggcgtgcgcgtgcgcgagatggccgagcgcgcgcccgagccg
gtacggcgacgggtgccggcggcgcctgcgccactgccggacgtggtcacccaaagcctg
gcccagttgcgcactgccgcacgcgattgccggcgttgcgagctgtggcaaccagcaacg
caaacagtgttcggcgaagggcccgacgatgcgtcggtgatggtgatcggcgagcagcct
ggcgatgaagaggacttgagcggtcgtccgtttgtcgggcctgccgggcgcctgttcaac
atggcattgggcgagctgggtgtggaccgagagaagttttacgtcaccaatgcggtcaag
catttccgtttcgagcagcgcggcaaacggcggctgcatcgcaatcccgagcgcacccat
gtacaggcctgtagcgggtggttgcaggccgaacgggcgcaattgcgtccggcccagatc
gtctgcctgggcgcgactgcggcgcaagcggtgttgggaagcagcttccgattgatgcgc
gagcgcgggcaatggcaacgcctggacgacggcacgccggtgttgaccacggtgcatccg
tcctgggtgttgcgccagccatcgaccgatgcgcgcgaagaagggtatcgcggatttgtc
gaagatctccgtcgattgctggatccaccgccgccgtccagcgatcagtcgagatag
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