Xanthomonas euvesicatoria pv. citrumelo F1: XACM_3725
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Entry
XACM_3725 CDS
T01616
Symbol
rpoH
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
xax
Xanthomonas euvesicatoria pv. citrumelo F1
Brite
KEGG Orthology (KO) [BR:
xax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xax03021
]
XACM_3725 (rpoH)
Transcription machinery [BR:
xax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
XACM_3725 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Phage_terminase
IF2_N
KORA
HTH_11
HTH_10
UCR_14kD
HTH_3
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AEO43969
LinkDB
All DBs
Position
complement(4311386..4312261)
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AA seq
291 aa
AA seq
DB search
MNQTTSTALVANNLPIPSALGSLDAYIGAVHQIPVLSVDEEQDLARRFRDELDLDAAREL
VHSHLRFVVHVARGYNGYGLPLGDLIQEGNIGLMKAVKRFDPDMGVRLVSFAVHWIRAEM
HEFILKNWRIVKVATTKAQRKLFFNLRKSKTRLGWLNASEVTAVAKDLNVSEREVMEMES
RLSGRDIGFDASSDEDDDHGPPSPVSYLVANEEDPSQAYERHDSEDNQLQLLREGMAGLD
VRSRDIVKRRWLDSDSKVTLQELADEYGVSAERIRQIEANALKKMKALFVA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagactacctcgactgcccttgtggcaaacaatctcccgattcccagtgcgctc
ggttcgctggacgcctacatcggtgccgtgcaccagatcccggtgctgtcggtcgatgag
gagcaggatctggcccgtcgcttccgcgacgagctggacctggacgccgcgcgcgaactg
gtccattcccacctgcgcttcgtggtgcacgtggcccgcggctacaacggctacggcctg
ccgctgggcgacctgatccaggaaggcaatatcggcctgatgaaggcggtcaagcgcttc
gacccagacatgggcgtgcgcctggtcagcttcgcggtgcactggatccgtgccgagatg
cacgagttcatcctgaagaactggcgcatcgtcaaggtcgccaccaccaaggcgcagcgc
aagctgttcttcaacctgcgcaagtccaagacccgtctgggctggctcaatgcgtcggaa
gtgactgcggttgccaaggacctgaacgtctccgagcgtgaagtgatggagatggagtcg
cgcctgtccggtcgcgatatcggtttcgacgcgtcgtcggacgaagacgacgatcacggc
ccgccgtcgccggtgagctatctggtcgccaatgaagaagacccgtcgcaggcgtacgag
cgtcacgacagcgaagacaaccagctgcagctgctgcgcgaaggcatggctggactggat
gtgcgttcgcgcgacatcgtcaagcgccgttggctggattccgattcgaaagtgacgctg
caggaactggcagacgaatacggcgtgtcggccgagcgtatccgccagatcgaagccaat
gcgctgaagaagatgaaggcgctgttcgtcgcctga
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