Xanthomonas sp. CPBF 426: XSP_000003
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Entry
XSP_000003 CDS
T10769
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XSP_000003 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaz03400
]
XSP_000003 (recF)
DNA repair and recombination proteins [BR:
xaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
XSP_000003 (recF)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_27
AAA_29
AAA_25
ABC_tran
AAA_16
AAA_22
AAA_18
AAA_13
Motif
Other DBs
NCBI-ProteinID:
CAD1785678
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Position
1:3791..4897
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AA seq
368 aa
AA seq
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MHVVRLSIHRLRRFATVDLHPARSLNLLTGDNGAGKTSVLEALHLMAYGRSFRGRVRDGL
IQQGASDLEVFVEWHEGTAETGERTRRAGLRHSGQEWAGRLDGEDVAQLGALCAALAVVT
FEPGSHVLISGGGEPRRRFLDWGLFHVEPDFLALWRRYARALKQRNALLKQGAQPRMLDA
WDHELAESGETLTSRRLRYLERLQERLIPVAAAIAPSLGLSALTFVPGWKRHEVSLADAL
LLARERDRQNGYTSQGPHRADWAPVFDALPGKDALSRGQAKLTALACLLAQAEDFAHERG
EWPVIALDDLGSELDRHHQARVLHRLASAPAQVLITATEVPPGLLDSGKLLHQFHVEHGN
VAVLRPAA
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtagtgcggttgtccatccatcgacttcgtcgtttcgcgaccgtcgaccttcac
cccgcccgttccttgaacctactgaccggcgataacggtgcaggcaagaccagcgtgctg
gaagcactgcacctgatggcctacggccgcagctttcgtggccgcgtgcgcgatggactg
atccagcaaggcgccagcgatctggaagtcttcgttgagtggcacgagggcacggccgag
acaggcgaacgcacgcgtcgggcaggtctgcgccatagcgggcaggaatgggccggccgg
ttggacggagaggatgtcgcacagctcggcgccctatgtgccgcgctggctgtggtgacc
ttcgagcccgggagccatgtgttgatcagtggtggcggtgaaccgcggcggcggttcctg
gattggggcctgttccacgtggaacctgacttcctggcgctatggcggcgctatgcgcgg
gcgctcaagcagcgcaatgccttgctcaagcagggcgcacagccgcggatgctcgatgcc
tgggatcacgaacttgccgaatccggcgaaacgctgacatcgcgtcgccttcgctacctt
gagcggctgcaggaacggttgattccggtcgccgctgccatcgccccgtcgctgggattg
tccgcgctgacattcgtgccgggctggaaacgtcatgaggtctcgcttgccgatgcgctg
ctcctggcacgcgagcgtgaccgtcagaacggctacacctcgcaggggccgcaccgcgcc
gattgggcacctgtcttcgacgcgctcccgggcaaggatgcgctctcacgtggccaggca
aagctcaccgccctcgcctgcctgctggcgcaggccgaagacttcgcacatgagcgtggc
gaatggccggtgattgcattggacgacctgggttcggagctggatcgccaccaccaggcg
cgcgtgctgcaccgcttggcctccgcaccggcccaggtgctgatcaccgccaccgaagtg
ccgcccggcctgctcgactccggaaagctgctgcaccagttccacgtggaacatggcaat
gtcgccgtgctgaggcccgcggcatag
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