Xanthomonas sp. CPBF 426: XSP_000106
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Entry
XSP_000106 CDS
T10769
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xaz03000
]
XSP_000106
Transcription factors [BR:
xaz03000
]
Prokaryotic type
Helix-turn-helix
Other families
XSP_000106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_lid_14
GAF
AAA_5
HTH_30
HTH_29
HTH_23
AAA_16
HTH_28
AAA_2
PAS_8
HTH_psq
HTH_7
HTH_17
AAA
Xre-like-HTH
Mg_chelatase
HTH_1
HTH_22
HTH_3
HTH_20
HTH_Tnp_1
HTH_Tnp_ISL3
HTH_IclR
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CAD1785971
LinkDB
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Position
1:complement(130905..132782)
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AA seq
625 aa
AA seq
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MAMSTEQQLGRARRSFFERGAMPAGQVPDAILQSWRRCQRQGLAAEATPAIEPVSAARLR
EMRERHETLWRRARAELEGLSADAAATGSVVLLTDEAGWILDAEGSTGFLERAGRVALMP
GACWSESVLGTNAIGTAIVESRSIEVRGGEHYLAPHGILSCAAAPIFDPYGQLVGVLDIS
GDARLQHIHALGLARRAVASIEHRYFDDGIADCELLRVHHDPALLGTAHEGLLAFRGGRL
VAANRAGLQLFGLERHELGRARYDALFEEPLTRLRHDGALFDRQGRALYGRVDERGDARP
RRRATQPPITVSAARQDGDRDAPLFEAEIERLLGRACRVLDAELPVLVQGETGTGKEVFA
RELHRRCTRAARPFVAVNCAALPEGLIEAELFGYEDGAFTGARKHGSPGLLRQAEGGVLF
LDEIGDMPLALQPRLLRVLQERELSPLGGGKPVRLDFALVCATHQDLQAAIADGRFRADL
YYRIAHHVVALPALRAHADRPLLVQELWQRLGQGRRLSADALRVLADYDWPGNLRQLSAC
LRTLVALSEPGERIDRDALPGYLATRTAVSALAAAAPAPTDSLEQLAQAAMRQALDACGG
NVAQAARRLGISRSTLYRRLGPQRA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgtcgacggagcagcagctgggccgggcgcggcgctcgttcttcgagcgtggc
gcgatgccggccgggcaggtaccggacgcgatcctgcagtcgtggcgacgctgccagcgc
cagggcctggccgccgaggcgaccccggcgatcgaaccggtcagcgccgcacgcctgcgc
gagatgcgcgaacgccacgagaccctgtggcggcgcgcgcgcgccgagctggaagggctg
tcggccgacgcagcggccaccggcagcgtcgtgctgctcaccgacgaggctggctggata
ctcgatgccgagggcagcaccggcttccttgagcgcgccgggcgggtggcgctgatgccc
ggcgcctgttggagcgagagcgtgctcggcaccaatgccatcggcaccgcgatcgtggag
agccgctcgatcgaggtccgcggcggcgagcactatctcgccccgcacggcatcctcagc
tgtgccgcggcgccgatcttcgacccttacgggcagttggtgggcgtgctcgacatctcc
ggcgacgcgcgtctgcagcacatccacgcgctgggactggcgcggcgcgcggtcgccagc
atcgagcaccgctacttcgacgacggcatcgccgattgcgaactgctgcgcgtacaccac
gacccggccctgctcggcaccgcgcacgagggcctgctggcattccgcggcgggcgcctg
gtggcagccaaccgcgccggcctgcagctgttcgggctggagcgccacgaactggggcgc
gcgcgctacgacgcgctgttcgaggagccgctgacccggctgcgccacgacggcgccctg
ttcgatcgccagggccgcgccctgtacgggcgcgtggacgagcgcggcgacgcgcggccg
cgccggcgcgccacgcagccaccgatcacggtctcggccgcccgccaggacggtgaccgc
gacgcgccgctgttcgaggccgagatcgagcgcctgctcgggcgcgcctgccgggtgctg
gatgccgagctcccagtgctggtgcagggcgagaccggcaccggcaaggaggtgttcgcg
cgcgagctgcaccgccgctgcacgcgcgccgcccgcccgttcgtcgcggtgaactgcgcc
gcgctgcccgagggtctgatcgaggccgagctgttcggctacgaggacggcgccttcacc
ggagcgcgcaagcacggcagcccggggctgctgcgccaggccgagggcggggtgctgttt
ctcgacgaaatcggcgacatgccgctggcgctgcaaccgcggctgctgcgcgtgctgcag
gagcgcgaactgtcgccgctgggtggcggcaagccggtgcggctggatttcgcgctggtt
tgcgccacccaccaggacctgcaagcggcaatcgccgacggccgcttccgcgccgacctg
tactaccgcatcgcccatcatgtcgtggcgctgccggcgctgcgcgcgcacgccgaccgc
ccgctgctggtgcaagagctgtggcagcgcctgggccagggccgccggctcagcgccgac
gcactgcgggtcctggccgactacgactggccgggcaacctgcgccagctctcggcctgc
ctgcgcacgttggtggcgctgagcgaacccggcgagcgcatcgaccgcgacgcgctgccg
ggctacctcgccacccggaccgcagtgtcggcgctagccgctgccgcaccggcaccgacc
gatagcctggagcagctggcacaggcggcgatgcggcaggcgctggacgcctgtggcggc
aacgtcgcgcaggcggcacgccggctcggcatcagccgcagcacgctgtatcgccggctc
ggcccgcaacgggcctga
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