Xanthomonas sp. CPBF 426: XSP_000234
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Entry
XSP_000234 CDS
T10769
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02481
two-component system, NtrC family, response regulator
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xaz02022
]
XSP_000234
Two-component system [BR:
xaz02022
]
NtrC family
Unclassified
XSP_000234
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA_16
AAA
HTH_30
AAA_2
AAA_22
Phage_NinH
HTH_28
AAA_7
FleQ
Motif
Other DBs
NCBI-ProteinID:
CAD1786359
LinkDB
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Position
1:284389..285726
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AA seq
445 aa
AA seq
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MARILIIDDDAAFLATLQATLRSLGHTVIAVDNGADGLMRLREGGIALAFVDFRMPEMDG
IQVLRARADDPRARQVPLVMLTAYASSGNTIEAMTLGAFDHLVKPVGRADIVEVVERALA
SRADGHTDAEASEPPDDDGLVGHSPAMRNVHKRIGLAAASDLPVLITGETGTGKELVARA
LHRASARAASAFVAVNCAAIPLELMESELFGHRKGAFSGATSDRIGLIREADGGTLFLDE
IGDMPLPMQAKLLRFLQEGEVTPLGGRGAQKVDVRVLAATHRDLAAWVAAGQFRSDLRYR
LNVVPIELPPLRERGQDIVLLAQYFLRAGDGAARALSADAQARLLAYPWPGNVRELRNVM
QRSQLLVRGHSIVAADLNDALDHSAEQPLTAAPLQGTLPEAVARLEKQMIQDALAHSSGN
RAEAARRLGIHRQLLYRKLDEYGLQ
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcatcctgatcatcgacgacgacgcggcgtttctggccaccttgcaggcaacg
ctgcgctcgctcggccatacggtgatcgcggtcgataacggcgccgatggattgatgcgc
ctgcgcgagggcggcatcgcgctggcgttcgtggacttccgcatgcccgagatggacggg
atccaggtgctgcgtgcgcgtgcagacgatccgcgcgcgcgccaggtgccgctggtgatg
ctcaccgcgtacgcgtccagcggcaacaccatcgaggcgatgacgctgggtgcattcgat
catctggtcaaaccggtggggcgtgccgatatcgtcgaggtggtggagcgtgcattggca
agtcgcgccgatggacacaccgatgccgaagccagcgaaccacccgacgacgatggcctg
gtcggccacagcccggccatgcgcaacgtgcataaacgcatcgggctggcggcggcttcc
gatctgccggtgttgatcaccggcgaaaccggtaccggcaaggaactggtcgcgcgcgcc
ctgcatcgcgccagcgcacgcgcagcgtcggcattcgttgcggtcaattgcgcggcgatt
ccgttggagttgatggaaagcgaattgttcggccatcgcaagggcgccttttccggggcg
accagcgaccgcatcggcctgattcgcgaagccgatggcggcaccttgtttctggacgag
atcggcgacatgccgctgccgatgcaggccaagttgttgcgcttcctgcaggaaggcgag
gtgacgccgctgggcgggcgcggcgcgcagaaggtggatgtgcgcgtgctggcggccacg
caccgcgatctggccgcgtgggtggccgcagggcagttccgcagcgatctgcgttatcgc
ctgaatgtggtgccgatcgaactgccgccgctgcgcgagcgcgggcaggacatcgtgctg
ctcgcgcagtatttcctgcgtgccggcgacggtgcggcgcgtgcgttgtcggcggatgcg
caagcgcggctgctggcctacccatggcccggcaacgtgcgcgagctgcgcaatgtcatg
caacgcagccagctgctggtgcgcggccacagcatcgttgccgcggatctgaacgacgcg
ctcgatcacagtgccgagcaacccctgacggccgcgccgctgcaaggcaccctgcccgag
gcagtggcgcggctggagaagcagatgatccaggacgcactggcgcacagcagcggcaac
cgcgccgaagccgcgcgccggctcggcatccatcgccagctgctgtaccgcaagctcgat
gagtacggcttgcagtag
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