Xanthomonas sp. CPBF 426: XSP_000478
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Entry
XSP_000478 CDS
T10769
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz02020
Two-component system
xaz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XSP_000478
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
XSP_000478
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xaz02035
]
XSP_000478
Bacterial motility proteins [BR:
xaz02035
]
Flagellar system
Chemotaxis proteins
MCPs
XSP_000478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP_N3
4HB_MCP_1
HAMP_2
HAMP
PMC2NT
ATG17_like
Laminin_II
Motif
Other DBs
NCBI-ProteinID:
CAD1787080
LinkDB
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Position
1:complement(562890..565136)
Genome browser
AA seq
748 aa
AA seq
DB search
MLTTIKSKFLLALLGTLIPSILLCLFLLNSLHTSKNNVGTLYNRDFIGSALASSIDGQLT
RVDINILRMIAIGTPELITQWKQENEKRFTQAAASIVELEQMLHNEKQHAAQLQKIKTSY
AAMQAGMQRQIELIEAGDIAGGAEVNRTQVKDNANATFAGLATLRDELASSAKLRYQQQQ
ATNTRAMTLSAIALGLIALAGVSLALILGNAISASIQRAVAAVEQLSRGVLDVDIKVSGK
DETVQLASAVYRIRDRLQGVIAAQLEMARRHDAGEMSYRMDEGAFPGEYGHMVRDANALV
SSHIAVTMRLTQIIGRYAIGDLSDEMDRLPGEKAVLTRTMDEVRANLTAMNDQIKQLAQA
AASGDFTARGDADRFQYDFHVMVDSLNQLMATADGNLQSLSSLLQSIAAGDLTARMRGDF
NGVFAQMRDDANTTAAQLADIVGRIQHSAVSINSAASEIAAGNQDLSQRTEQQAANLEET
AASMEELTSTVRQNAEHARQANQLAIGAASVASQGGEIVSKVVGTMAGIEASSRKIADII
SVIDGISFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSTAAAKEIKGLIDDSV
QRVAEGSTLVHTAGSTMAEIVASVQRVTDIMGEISAASQEQSAGIEQVNLTVTQMDETTQ
QNAALVEEATAAARSMEEQAGQLTQAVAVFKIEEAKVRTAHAPARATAAHNVAQGKNPAP
GKTPTRRAVAPQKPTAPTAMDAANWREF
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccacgatcaagagcaaatttttattggcattgttgggaacgctgatcccgagc
atcctgctctgcctgttcctactgaacagcctgcacacctccaagaacaatgtcggcacg
ctctacaaccgggacttcatcggctctgcacttgccagcagcatcgacggccagctgacg
cgcgtcgacatcaacatcttgcgcatgattgccatcggcacgccggagctgattacgcag
tggaaacaggaaaacgagaagcgattcacccaggcggccgccagcatcgtggaactggag
cagatgctgcacaacgaaaagcagcacgcggcccagttgcagaagatcaagacgagctac
gcggccatgcaggccggcatgcagcgccagatcgagttgatcgaggcaggagatatcgcg
ggcggcgcggaagtcaaccgcacccaggtcaaggacaacgcgaacgccacgttcgccggg
ctggccaccttgcgcgatgagctggccagctccgccaagctgcgttaccagcagcagcaa
gccaccaacacgcgcgcgatgaccctgtcggcgatcgccctgggcctgattgcactggcc
ggcgtcagcctcgcactgatcctgggcaacgcgatctccgcctcgattcagcgggcagtg
gccgccgttgagcaactgtcgcgcggcgtgctggatgtcgatatcaaggtcagcggcaag
gacgaaaccgtacaacttgccagcgcggtctaccgcatccgcgatcgtctgcaaggggtc
atcgcggcgcagctggaaatggcccgtcgacacgacgctggcgaaatgagctaccgcatg
gacgagggcgcatttcccggagagtatggccacatggtgcgcgatgccaacgcgctggtg
agttcgcacatcgcggtgacgatgcgcctgacccagatcatcgggcgctacgccattggt
gatctctccgacgagatggaccgcctgccgggcgaaaaggcggtgcttacccggaccatg
gacgaggtcagggccaatctgaccgcgatgaatgaccagatcaagcagctcgcgcaggcc
gccgccagtggcgatttcaccgcgcgcggcgacgccgaccgtttccagtacgatttccac
gtgatggtcgacagcctgaaccagctgatggccaccgccgatggcaacctgcagtcgctg
tcgtcgctgctgcaatccatcgccgccggcgacctgaccgcgcgcatgcgcggcgacttc
aatggcgtgttcgcgcagatgcgcgacgacgccaacaccaccgccgcgcagcttgcagac
atcgtcggacgcatccagcactcggcggtgtcgatcaactcggccgccagcgagatcgcc
gccggcaaccaggacctgtcgcagcgcaccgaacagcaggccgccaacctggaagaaacc
gccgcctcgatggaagagctgacgtccacggtcaggcagaatgccgagcacgcgcgtcag
gccaatcaactggcgatcggcgcggcaagcgtggcatcgcagggcggggagatcgtcagc
aaggtcgtcggcaccatggccggcatcgaagcctcgtccaggaagatcgccgacatcatt
tcggtcatcgacggcatctcgttccaaaccaatatcctggcgctcaatgccgccgtggaa
gcggcgcgtgccggcgaacagggccgtggcttcgcggtggtcgcctcggaagtgcgcacc
ctggcccagcgctccaccgcggcggccaaggagatcaagggattgatcgacgactcggtg
cagcgcgttgccgaaggctcgacgctggtgcataccgcgggctccacgatggcggagatc
gtggccagcgtacagcgcgtgaccgacatcatgggcgagatctccgccgcctcgcaggaa
cagtccgcaggcatcgagcaggtcaacctcaccgtgacccagatggacgaaaccacccag
cagaacgcggcactggtggaagaagccaccgccgcggcgcgttcgatggaagaacaggcc
gggcaactcacgcaggcggtcgcggtgttcaagatagaagaggccaaggtccgcaccgcg
cacgccccggcgcgggcaacagcagcccataacgtcgcccaggggaaaaacccggcacct
ggcaagacgccgacacgccgggcggttgcgccacaaaagccgaccgctcccaccgccatg
gatgccgccaactggcgagaattttag
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