Xanthomonas sp. CPBF 426: XSP_000677
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Entry
XSP_000677 CDS
T10769
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
xaz03000
]
XSP_000677
Transcription factors [BR:
xaz03000
]
Prokaryotic type
Helix-turn-helix
Other families
XSP_000677
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
HTH_8
Sigma54_activ_2
PAS_4
HTH_30
PAS
HTH_23
PAS_9
AAA_5
HTH_7
MCM
AAA_2
HTH_22
HTH_AraC
PAS_8
HTH_20
HTH_17
HTH_50
HTH_28
TsaE
Mga
Motif
Other DBs
NCBI-ProteinID:
CAD1787669
LinkDB
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Position
1:complement(806695..808668)
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AA seq
657 aa
AA seq
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MSEPSVVAATSIALPEIEPDALRQIRRLRDIAPLAAPLSRSWRRCLDDYALLPEAAPEPL
VHDALHVRERQQRLGDVLRIAKVEMENLYEQIAGSGYAVIFADAEATVLHSVHDPTLLRE
FRQAGLFCGASWAECHQGTNGLGTCAAERTAVSVHRGEHYLTRHLPLSCSGAPILDPHGG
LLAVLDASTPNAQDGKQTQRHTVALVSMSAAQISRSHFLNQFGHAFILRFHSRPEFAGLL
HEALIAIDTDGRVLAVNEAVLEQLGKLDRSQLVGRNIAQVMQLDFDTLEHRAGSDAGTLW
SIRCACHGRRFYALVRPPRARPALPAVGGPAQLAPDTELQPGEHVGSDSRMRHNLANALK
LAAHRVSILLRGDTGTGKEEFAKAVHRGSPWAGGAFVAINCAAIPEALIESELFGYARGA
FTDAAREGRHGKLLQASGGTLFLDEIGDMPLPLQSRLLRVLEEQCVTPLGSERAVPLELH
VISASHRDLAQRVAAGEFREDLYYRLNGVVLHLPPLRERSDKAELIRTLLREENSEHSVR
ISEEAMHKLLSYAWPGNLRQLRNVLRTAAVLCSDGVIRLPNLPQEIVDAGSAPCLVDGRA
VAADDMPGRVALDQAERLVLQQQLERHRWNVSRTADALGISRNTLYRKLRKHGLDTG
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccaagcgttgtcgccgccacgtccatcgccctgcccgagatcgaaccggat
gcgctccggcagatccgccggctgcgcgacattgcgccgcttgccgcaccactgtcgcgc
tcgtggcggcgctgcctggacgattacgccttgttgcccgaggcagcccccgagccgctg
gtgcacgatgcgctgcacgtgcgcgagcgccagcaacgcctgggcgatgtgctgcgcatt
gccaaggtggagatggaaaatctctacgagcagatcgccggcagcggctatgcggtgatc
tttgccgacgccgaggcgaccgtgctgcacagcgtgcacgacccgaccctgctgcgcgaa
ttccgccaggccggtctgttctgcggcgccagctgggccgagtgccatcaaggcaccaac
ggcctgggcacctgcgcggccgagcgcactgcggtgagcgtgcatcgcggcgaacattat
ctgacccgccatctgccgctgtcgtgcagcggcgcgccgatcctggacccgcacggcggc
ctgctggcggtgctggatgcgtccacccccaatgcgcaggacggcaagcagacccagcgc
cacaccgtggcgctggtgagcatgtcggcggcgcagatctcgcgctcgcatttcctcaac
cagttcggccatgccttcatcctgcgcttccatagccggcccgagttcgccggcctgctg
cacgaggcgctgattgcgatcgacaccgacggtcgcgtgctggcagtcaacgaggcggtg
ctggagcaactgggcaagctcgatcgcagccagctggtgggccgcaacatcgcgcaggtg
atgcagctggatttcgacaccctcgagcaccgcgccggcagcgatgccggcaccttgtgg
tcgatccgctgcgcctgccacgggcggcgtttctacgcgctggtgcgcccgccgcgtgcg
cgccccgcgctgccggcggtgggcgggccggcgcagctggcgcccgataccgagctgcaa
cccggcgagcacgtcggctcggactcgcgcatgcgccacaacctggccaatgcgctgaag
ctggccgcacatcgcgtatcgatcctgctgcgtggcgataccggcaccggcaaggaggaa
ttcgccaaggcagtgcatcgtggctcgccgtgggccggcggcgccttcgtggcgatcaac
tgcgcggcgattcccgaggcgttgatcgagagcgaattgttcgggtatgcgcgcggcgca
ttcaccgatgccgcgcgcgaaggccgccacggcaagctgctgcaggccagcggcggcacg
ctgttcctggacgaaatcggcgacatgccgctgccgttgcagagccgcctgctgcgtgtc
ctggaagaacaatgcgtcaccccgctgggcagcgaacgcgcggtgccgctggagctgcac
gtgatcagtgccagccaccgcgatctggcgcagcgggtggcggccggcgagtttcgcgag
gatctgtattaccggctcaatggcgtggtgctgcatctgccgccgctacgcgaacgcagc
gacaaggccgagctgatccgcaccctgctgcgcgaggagaacagcgagcacagcgtgcgc
atcagcgaagaagcgatgcacaaactgctgagctacgcatggccgggcaacctgcgccag
ttgcgcaatgtgctgcgcacggcggcggtgttgtgcagcgacggcgtgatccgcctgccg
aatctgccgcaggaaatcgtcgatgccggcagcgcaccgtgcctggtcgatggccgcgcg
gtggccgccgacgacatgcccggccgcgtcgcactcgaccaggccgaacgcctggtgctg
cagcaacaactcgaacgccaccgctggaacgtcagccgcaccgccgatgcgctgggcatc
agccgtaatacgctttatcgcaagctgcgcaagcacggcctggataccggttga
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