Xanthomonas sp. CPBF 426: XSP_001040
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Entry
XSP_001040 CDS
T10769
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xaz03032
]
XSP_001040
03036 Chromosome and associated proteins [BR:
xaz03036
]
XSP_001040
03400 DNA repair and recombination proteins [BR:
xaz03400
]
XSP_001040
DNA replication proteins [BR:
xaz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
XSP_001040
Chromosome and associated proteins [BR:
xaz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
XSP_001040
DNA repair and recombination proteins [BR:
xaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
XSP_001040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Lmo2446-like_N
Motif
Other DBs
NCBI-ProteinID:
CAD1788731
LinkDB
All DBs
Position
1:1212996..1213268
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIDGVAAAADISKAEAGRAVDAVVSEITKALKKGDAVTLVGFGTFQVRARAERTG
RNPKTGDSIKIAASKNPAFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaccgaattgatcgatggcgttgccgctgccgctgacatctccaaggctgag
gccggccgtgctgttgacgcggttgtgagcgaaatcaccaaggcgctgaagaagggcgat
gccgtcaccctcgttggctttggcaccttccaggtccgcgcgcgcgctgagcgtaccggc
cgcaatccgaagaccggcgacagcatcaagatcgctgcttcgaagaatcctgcgttcaag
gctggcaaagccctgaaggatgcagtaaactaa
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