Xanthomonas sp. CPBF 426: XSP_001125
Help
Entry
XSP_001125 CDS
T10769
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xaz02000
]
XSP_001125
Transporters [BR:
xaz02000
]
Other transporters
Pores ion channels [TC:
1
]
XSP_001125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
CAD1788964
LinkDB
All DBs
Position
1:1291851..1294067
Genome browser
AA seq
738 aa
AA seq
DB search
MSASRSLKISALAVAVASLLPLHAAAQQAPSDDGVVRLDAVKVTVERRSEDSKDVPVSAS
VLRPEFLDAISTSGSDIRVLAGKAPSLNIESSNGRVFPRVYIRGYGNTDFNTYASQPVSL
IYDDVVQENAFLKGFPIFDLEGLEVLRGPQGTLFGRNTPAGVVKFNSVKPTIGANDGYAS
LSYGTYGTMTLESGLSIAMGEHWAARLSTLGQRRDDWVENRDGRDLEGYTDSAVRLQLLY
QASDDFSALFNAHARHLDGTARLFRANVIQPGTNQLVDGFDEEKSFIDGANNQELQTYGG
SANLTWDLGDIALHSITAYEGIGKYYSRGDIDGGFGAVFAPPSGPGVIPFPVETAGGIKS
LDQYSQELRAESQYEGPLNWQAGLYYFHDDVEGENYTYNTFSGGDLASYQLTRQRNTSWA
AFGSLNYAATDRLNLRAGIRYTYDKKTFDVLALDRVTLVEPSSGETDNSKVTGDLAATFA
INDDVNVYARAARGFRGASFGVPSGTAPLTVAEPETVDSFEIGIKSDLFDNRARLSFDIY
DFRVKNQQLTAVGGVSNDVRLLNADKTKARGAEFDFEALLTQNLRVTAGGAYNWTRIDDP
ALSVGVCRTCTVTDPLNAAGNAIIDGNDLPQAAKWMANATLRYGIPMGNDGELFFYTDWS
YRSEVNFFLYDSKEFTGQPLVEGGAKIGYNWGAGAYEVSVFCRNCTNQIRVTGAIDFNNL
TGFINDPRIVGAQFRANF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccagccggtcgctcaagatcagcgcgctcgccgttgccgtcgcttcccttctt
ccgcttcatgccgccgcccagcaggcgcccagcgacgacggtgtcgtgcgcctggacgcg
gtcaaggtcacggtcgagcgccgctcggaagattccaaggacgtgccggtctcggcatcg
gtgctgcgtccggaatttctggatgccatctccaccagcggctcggatatccgcgtgctc
gcgggcaaggcgcccagcctcaacatcgaatcgtccaacggccgtgtgttcccgcgcgtg
tacatccgcggctacggcaacaccgacttcaacacctacgcctcgcagccggtgtcgctg
atctatgacgacgtggtgcaggaaaacgcgttcctgaagggcttcccgatcttcgatctg
gaaggcctggaagtgctgcgtggcccgcagggcacgctgttcggccgcaacacgccggcc
ggcgtggtcaagttcaactcggtcaagccgaccattggcgccaacgacggctacgccagc
ctgtcctacggcacctacggcacgatgacgctggaaagcggcctgagcatcgccatgggc
gagcattgggcggcgcgtctgtccacgctgggccagcgtcgcgacgactgggtggaaaac
cgcgatggccgcgacctggaaggctataccgattcggccgtgcgcctgcagctgctgtac
caggccagcgacgacttcagtgccttgttcaacgcgcatgcgcgtcacctggacggcacc
gcgcggctgttccgcgccaacgtcatccagcccggcaccaaccagctggtggacggcttc
gacgaagagaagtccttcatcgacggcgccaacaaccaggaactgcagacctatggcggc
agcgccaacctgacctgggacctgggcgacatcgcgctgcactcgatcaccgcctacgaa
ggcatcggcaagtactacagccgcggcgacatcgacggcggcttcggcgcggtgttcgca
ccgccgtccggcccgggcgtgattccgttcccggtggaaaccgccggcggcatcaagagc
ctggaccagtacagccaggaactgcgcgccgaatcgcagtacgagggcccgctcaactgg
caggccggcctgtactacttccatgacgatgtggaaggcgaaaactacacctacaacacc
ttcagcggcggcgatctggccagctaccagctgacccgccagcgcaacacctcatgggcg
gcattcggctcgttgaactatgcggccaccgatcgcctgaacctgcgcgccggcatccgc
tacacctacgacaagaagaccttcgacgtgctggcgctggatcgcgtcacgctggtcgag
ccgtccagcggcgagaccgacaactccaaggtcaccggcgatctggcggccaccttcgcc
atcaacgacgacgtcaacgtgtacgcccgtgcggcacgcggcttccgcggcgccagcttc
ggcgtgccctcgggcaccgcgccgctgaccgtggccgagccggagacggtggattcgttc
gagatcggcatcaagtcggatctgttcgacaaccgcgcgcgcctgagcttcgacatctac
gatttccgcgtcaagaaccagcagctcaccgcggtgggcggcgtctccaacgacgtgcgc
ctgctcaacgccgacaagaccaaggcgcgcggcgccgagttcgacttcgaagcgctgctc
acccagaacctgcgcgtcaccgccggcggcgcctacaactggacccgcatcgacgacccg
gcgctgtcggtgggcgtgtgccgcacctgcaccgtgaccgacccgctcaacgcggccggc
aacgccatcatcgacggcaacgatctgccgcaggctgccaagtggatggccaacgccacc
ctgcgttacggcatcccgatgggcaacgacggcgagctgttcttctacaccgactggtcc
taccgcagcgaagtgaacttcttcctgtacgactccaaggagttcaccggccagccgctg
gtcgaaggcggcgccaagatcggctacaactggggtgcgggcgcgtacgaggtgtcggtg
ttctgccgcaactgcaccaaccagatccgtgtgaccggtgcgatcgacttcaacaacctc
accggcttcatcaacgacccgcgcatcgtcggcgcgcagttccgcgccaatttctga
DBGET
integrated database retrieval system
