Xanthomonas sp. CPBF 426: XSP_001174
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Entry
XSP_001174 CDS
T10769
Name
(GenBank) alginate lyase family protein
KO
K20525
oligo-alginate lyase [EC:
4.2.2.26
]
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
XSP_001174
Enzymes [BR:
xaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.26 oligo-alginate lyase
XSP_001174
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hepar_II_III_C
Alginate_lyase
Alg17C_C
DSE-like_N
Motif
Other DBs
NCBI-ProteinID:
CAD1789110
LinkDB
All DBs
Position
1:complement(1355628..1357871)
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AA seq
747 aa
AA seq
DB search
MTRSTRLLLLVLVGAGSALSCIAAPSPAAEPAAQPQPRATDAAPVLVTAQQWRAMASDGA
RLPVFAREQARAEASVRAAMGAGVDVPVPRDPGGGASHEQHKRNYQAIQAAGALYRLTGD
RAYADYARDVLLAYARLYPTLGAHPAGRGQVPGRLFWQSLNDSVWLVYASQGYDAIRDTL
SAQDRATIDRDVFARMAHFLCDESADNFDKIHNHATWAVAAVGMTGYVLRDQALVDKALR
GSRRDGKAGFLAQVDQLFSPDGYYAEGPYYQRYALAPFVLFANAIARNQPQQRIFQRRDG
VLLKAVDSLVQSSYGGYFFPINDAILDKGLDTEELVAGIGIAYAQTHDAQLLSIAQRQRR
VLLTPEGLAVASALAQDRAQPFAFGSVLLRDGARGDQGALAILRSGGDDGQTLVMKNTSQ
GMGHGHFDKLNWLFYDNGQRVVTDYGAARFLNVEAKAGGIYLPENSSWAKQTIAHNTLVV
NETSHFNGDWKVGEQHAPTQLLFAGSADTRIASARMQQAYDGVSFTRTQALLSHPQLRLP
VVVDLLRVSGSAPARYDLPLHFNGQIMQVGFTAERALTQRPVLGKANGYQHLWVDASSDA
STDTRSLSWLLAGRFYSYRFGSSAPARALLVESGANDPDFNLRREPALIQRVDGQANVSF
FGVLEPHGEYNGTAEYVHGADSRIRAIERVRGDDAEVIVLTLVGGQRIALAVADDADAQR
AHQVQAGGQHYRWRGGYARFDRAAGEK
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgacccgttccacccgcctgttgctgctggtcctggtcggcgccggcagcgccctgtcc
tgtatcgccgcgccgtcaccagcggccgagccagcggcgcagccgcaaccgcgcgccacc
gacgccgcaccagtgctggtcaccgcccagcaatggcgcgccatggccagcgatggcgcc
aggctgccggtgttcgcccgcgaacaggcacgcgcagaagccagcgtgcgcgcggcgatg
ggggccggtgtggacgtgccggtgcccagggaccccggcggcggcgccagccacgaacag
cacaaacgcaactaccaggccatccaggcagccggcgcgctataccggctcaccggcgac
cgcgcctatgccgactatgcgcgcgacgtgctgctggcctacgcacgcctgtatcccacg
ctgggcgcacaccccgccgggcgcggccaggtgccggggcggctgttctggcagtccttg
aacgactcggtgtggctggtctacgcaagccagggctacgacgccatccgcgacacgctc
agcgcgcaggaccgcgccaccatcgaccgcgacgtgttcgcgcgcatggcgcactttttg
tgcgacgaaagcgcagacaacttcgacaagatccacaaccatgccacctgggcggtagcc
gccgtgggcatgaccggctatgtgctgcgcgaccaggcgctggtggacaaggcgctgcgc
ggcagcaggcgcgatggcaaggccggcttcctggcgcaggtggaccagctgttctcgccg
gacggctactacgccgaaggcccgtattaccaacgctatgccctggcgccgttcgtgctg
ttcgccaacgcgatcgcgcgcaaccagccgcagcaacgcatcttccagcgccgcgacggc
gtgctgctcaaggccgtggacagcctggtgcagagcagctacggcggctatttcttcccg
atcaacgacgccatcctcgacaagggcctggacaccgaggaactggtggccggcatcggc
atcgcctacgcgcagacccacgatgcgcaactgctgtccatcgcacaacgccagcgccgc
gtgctgctcacccccgaaggcctggccgtggccagcgcgctcgcgcaggaccgcgcccaa
ccgttcgccttcggcagcgtgttgctgcgcgatggcgcacggggcgaccagggcgcgctg
gcgatcctgcgcagcggcggcgacgacggccagacgctggtgatgaagaacacctcgcag
ggcatgggccacggccatttcgacaagttgaactggctgttctacgacaacggccagcgc
gtggtcaccgactacggcgcggcgcgtttcctgaacgtggaagccaaggccggcggcatc
tatctgccggaaaacagcagctgggccaagcagaccattgcgcacaacacgctggtggtg
aacgagaccagccacttcaacggcgactggaaggtgggcgagcagcatgcgccgacgcag
ctgctgttcgccggcagtgccgacacccggatcgcctcggcgcgcatgcagcaggcctac
gacggggtcagcttcacccgcacccaggcgctgctgtcgcacccgcagctgcgcctgccg
gtggtggtcgacctgctgcgcgtcagcggcagcgcgccggcacgctacgacctgccgctg
cacttcaacgggcagatcatgcaggtcggcttcaccgcagagcgcgcactgacgcaacgt
ccggtgctgggcaaggccaacggctatcagcacctgtgggtggacgcctccagcgatgcg
agcaccgacacgcgcagcctgagctggctgctcgccggccgcttctacagctaccgcttt
ggcagcagcgcgccggcgcgtgccctgctggtggagagcggagccaacgacccggacttc
aacctgcgccgcgaaccggcgctgatccagcgcgtggatgggcaggccaatgtcagtttc
ttcggcgtgctggaaccgcatggcgaatacaacggcactgccgaatacgtgcatggcgcc
gacagccgcatccgcgccatcgagcgcgtgcgcggcgacgatgccgaggtgatcgtgctc
accctggtcggcggccagcgcatcgcgctggcggtggccgacgacgccgatgcacaacgc
gcccaccaggtgcaggccggaggccagcactaccgctggcgcggcggttacgcgcgcttc
gatcgcgctgcaggtgaaaaatga
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