Xanthomonas sp. CPBF 426: XSP_001517
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Entry
XSP_001517 CDS
T10769
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaz03400
]
XSP_001517
Enzymes [BR:
xaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
XSP_001517
DNA repair and recombination proteins [BR:
xaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
XSP_001517
Prokaryotic type
XSP_001517
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAD1790128
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All DBs
Position
1:1767593..1769011
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AA seq
472 aa
AA seq
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MSYAIVWFRRDLRLEDNPALQAALDAGHQPIPLYIDAPHEEGEWTPGAASRSWRHRSLAA
LDAALRALGSGLVIRAGDSAQALDEVIAQTKAVAVYWNRKYEPATQPRDAQIKRSLRERG
IEVHSCNSALLFEPWQLATQQGGPYKVFTPFWRNALTQLQLPAAAPAPRSLPPLPVQVKT
MAVETLGLLPTLDWDRGFWDHWQPGEAGAHEMLEIFIDGALSGYRENRDRPDRVGTSQLS
PHLHFGEIAPWRIASTLEANRSARNAAEIDGYIRQLGWRDFAYHLLHHFPDTTNQNLNPR
FEGFDWAKVDPVALQAWQRGRTGIPIVDAGMRQLWHTGWMHNRVRMIVASLLCKHLRVHW
IEGARWFWDTLVDADLANNTMGWQWVAGTGADAAPYFRVFNPVTQAEKFDPQAAYITRWL
PELGKLAVKERFAPWLHPLSLARLAPEYPRTPVIGLAEGRDAALAAYAKTRG
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacgccatcgtctggttccgtcgcgatctgcgcctggaagacaacccggccttg
caggctgcgctggatgcggggcaccagccgattccgctgtatatcgatgcgccgcacgaa
gaaggcgagtggacaccgggcgcggcctcgcggagctggcggcatcgctcgcttgcggca
ctggatgcggccttgcgcgcgctgggcagcggcctggtcattcgcgccggcgacagcgcc
caggcactggatgaggtgattgcgcagaccaaggcggtggcggtgtactggaaccgcaag
tacgagccggccacacagccgcgcgatgcgcagatcaagcgcagcttgcgtgagcgcggg
atcgaggtgcacagctgcaactccgcactgctgttcgaaccctggcagttggcgacgcag
cagggcggcccgtacaaggtgttcaccccgttctggcgcaacgcactcacgcagctgcaa
ttgcctgctgccgcgccggcaccgcgcagcctgccgccgttgccggtgcaagtgaagact
atggcggtggagacgctcgggttgctgccgacgctggactgggaccggggcttctgggac
cactggcagcccggcgaggccggcgcgcacgagatgctggagatcttcatcgacggtgcg
ctgtccggctaccgcgaaaaccgcgaccggcccgatcgggttggcacctcgcagctgtcg
ccgcatctgcacttcggcgagatcgcgccgtggcggatcgccagcacgctggaagccaat
cgcagcgcacgcaacgcggcggagatcgacggctatatccgccaattgggctggcgcgat
tttgcgtatcacctgctgcaccattttcccgataccaccaaccagaatctcaacccgcgc
ttcgaaggcttcgactgggcaaaggtggacccggtcgcgttgcaggcctggcagcgcggc
cgcaccgggattccgatcgtcgatgccggcatgcgccagctctggcacaccggctggatg
cacaaccgcgtgcgcatgatcgtggcgagcctgttgtgcaagcatctgcgcgtgcactgg
atcgagggcgcacgctggttctgggacaccttggtggatgcggacctggccaacaacacg
atgggctggcaatgggtcgccggtaccggcgccgatgcagcgccgtatttccgcgtgttc
aacccggtcacgcaggcggagaagttcgatccacaggcggcctacatcacgcgttggcta
ccggaactcggcaagcttgcggtgaaggaacgcttcgcgccgtggctgcatccgttgtcg
ttggcgcgtctggcaccggagtatccgcgtacgccggtcatcggcctggccgagggccgc
gacgcggcgttggcggcctatgcgaaaacgcgcggataa
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