Xanthomonas sp. CPBF 426: XSP_001956
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Entry
XSP_001956 CDS
T10769
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz02020
Two-component system
xaz02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XSP_001956
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
XSP_001956
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
xaz02035
]
XSP_001956
Bacterial motility proteins [BR:
xaz02035
]
Flagellar system
Chemotaxis proteins
MCPs
XSP_001956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
sCache_2
dCache_2
HAMP_N3
HAMP_2
HAMP
Cache_3-Cache_2
DUF211
DUF1664
Motif
Other DBs
NCBI-ProteinID:
CAD1791424
LinkDB
All DBs
Position
1:complement(2271520..2273697)
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AA seq
725 aa
AA seq
DB search
MTFKTTIANTLANVPLKRKFLAQTALVALGIIVLAVIAARLQYVDLTDTRRDGLKSQIEM
AIAVVNGYAERAEKGEMDVDSAKKAALHTLSTMRARGGVDYIYVTDQTPVMLMHPTRPDL
IGKPLNDVLSPDGKRIFPAFVSAAQAGGGYVDYAWAKPGEKDPVQKTSYASLYKPWGWVI
GTGVYLDDTQAQALVFTGIVTLAGGVLVLLNLLVGWLIGNSVLEPVSRALAAIKGVARGD
LSVRTAQHGSDEIGQMLKATDDMVHTLERFSAQTKVMMHMHAGEDVSHRMPTDFPGVYGE
LAGGINTMIFEHLDAIIDAIGILNEYAQGDLSRDAARLPGTRAVLHEAMDAAKASLLAIN
TEIKRLAQAAANGDFSQRGDATRFRHDSARMINDLNAMMDVSDRNLGKLSELLAALAEGD
LTARLDGEFHGVFARMRDDANTTATQLAGIVGRIQQAAGAITGSASEIAAGNNDLSQRTE
QQAANLEETAASMEELTSTVRQNAESARQANQLAIGAASVASQGGQVVSQVVDTMSGIQT
SSKKIAEIISVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRTLAQRSAGAAKE
IKHLIDDSVGKVAQGSALVDQAGKTMAEIVSSVQRVTDIMSEISAASQEQSAGIEQVNLT
VTQMDESTQQNAALVEEATAAANAMQQQAQQLDEAVSSFRVTAASPVQRGPARDAARAEA
LRVAS
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcaagaccacgattgcaaacacgctggccaacgtaccgctgaagcgcaagttt
ctggcgcagaccgcgctggtggcgctgggcatcatcgtgctggcggtgatcgccgcacgc
ttgcaatatgtggatctcaccgatacgcgccgcgacgggctcaagagccagatcgaaatg
gccatcgcggtggtcaatggctatgccgagcgcgcggagaaaggcgagatggatgtggac
agcgccaagaaggccgcgctgcataccttgtccaccatgcgcgcacgtggcggcgtggat
tacatctacgtcaccgaccagacgccggtgatgctgatgcaccccacccgcccggacctc
atcggcaagccgctcaacgatgtgctgagccccgacggcaagcgcatcttcccggccttc
gtcagcgcggcgcaggccggcggcggctacgtcgattacgcctgggccaagcccggcgaa
aaagacccggtgcagaagacctcctacgcctcgctgtacaagccgtggggctgggtgatc
ggcaccggcgtgtatctggacgacacccaggcgcaggcgctggtcttcaccggcatcgtc
accctggccggcggcgtgctggtgctgctcaacctgctggtgggctggctgatcggcaat
tcggtgctggagccggtgtcgcgcgcgcttgccgccatcaagggcgtggcgcgtggcgat
ctgagcgtgcgcaccgcccagcatggcagcgatgaaatcggccagatgctcaaggccacc
gacgacatggtgcatacgctggagcgcttctccgcgcagaccaaggtgatgatgcacatg
cacgccggcgaagacgtcagccaccgcatgcccaccgatttccccggcgtctacggcgag
ctggccggcggcatcaacacgatgatcttcgaacacctggacgccatcatcgacgcgatc
ggcatcctcaacgagtacgcgcaaggcgatctgtcgcgcgacgccgcgcgcctgcccggt
acccgggcggtgctgcacgaagcgatggatgcggccaaggccagcctgctggcgatcaac
acagagatcaagcggctggcccaggctgcggccaatggcgacttcagccagcgcggcgat
gccacgcgtttcaggcacgactcggcacgcatgatcaacgacctcaacgcgatgatggac
gtcagcgaccgcaacctgggcaagctgtccgagctattggccgcgctggccgagggcgac
ctcaccgcgcgcctggacggtgagttccacggcgtgttcgcgcgcatgcgcgatgatgcc
aacaccaccgccacgcagctggccggcatcgtcgggcgcatccagcaggccgccggtgcc
atcaccgggtcggccagcgagatcgccgccggcaacaacgacctgtcgcagcgcaccgaa
caacaggcagccaacctggaagaaaccgccgcctcgatggaagagctcacctccacggtc
aggcagaacgccgaaagcgcccgccaggccaaccagctggcgatcggcgcggcatcggtg
gcctcgcaaggcggccaggtggtcagccaggtggtggacaccatgtccggcatccagacc
tcgtcgaagaagatcgccgagatcatctcggttatcgatggcatcgccttccagaccaat
atcctggccttgaacgcggcggtggaagccgcccgtgccggcgaacagggccgcggcttt
gccgtggttgcctccgaggtgcgcacgctggcgcagcgctcggccggcgcggccaaggag
atcaagcacctgatcgacgattcggtcggcaaggtggcgcagggctcggcgctggtggat
caggccggcaagaccatggccgagatcgtgtcctcggtgcagcgcgtgaccgacatcatg
agcgagatctctgccgcctcgcaggagcaatcggccggcatcgagcaggtcaatctcacc
gtcacccagatggacgagagcacccagcagaacgccgcgctggtggaagaagccaccgcc
gccgccaacgccatgcagcagcaggcgcagcagctcgacgaggcggtgtccagcttccgg
gtgaccgcggcctcgcccgtgcagcgcggccccgcccgtgatgccgcgcgcgcggaggcc
ctgcgcgtcgccagctga
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