Xanthomonas sp. CPBF 426: XSP_002239
Help
Entry
XSP_002239 CDS
T10769
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xaz03009
]
XSP_002239
Enzymes [BR:
xaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
XSP_002239
Ribosome biogenesis [BR:
xaz03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
XSP_002239
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
CAD1792275
LinkDB
All DBs
Position
1:2600978..2602615
Genome browser
AA seq
545 aa
AA seq
DB search
MSDTPRKLSLNKLSLKRDSAPEAPKLEERLHKVLAQAGLGSRRALEQRIADGLIKVNGAV
AQTGMSVRSGDKIELDGRSFVASALTEPARVLIYNKPEGEVTTREDPEGRPTVFESLPVL
KGSRWIAIGRLDINTTGLLLLTTDGELANAMMHPSYEVEREYVVRVRAPEGEDKVSDAII
ERLSRGVLLEDGGAKFDEIERIGGTDSHDWFRVVVKEGRNREVRRLWESQGCQVSRLKRS
RYGKISLPRELLRGQSIEVAQDKVDALRAELKLEEGAPSALTLQPVIGQRRAAKSTVHVS
RDGRSNAYVNGQTSGADEGRELRRFDNLREDRGGRGRGKPGGFRGGLTVSGEAAAKQSQQ
RPFKQRAPGKGDRALPDGNPAAFRSWYVPDGVSTGPSGHRNAGPSGPGTGQARPYAKKGP
GGARPGGGPGNARSGAAGQGRGGAGGGQGQSQGQGQRKHPYGHPGNAPSFPSDHANPGFS
PYGAARPAAGRPSGARAGGPGGNRGPGGNRGPGGPGGASRGPGGPGGRPPGGGNRRPPGG
GNRGR
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacaccccccgcaagctgtcgttgaacaagctttccctcaagcgcgacagcgcg
cccgaagcgcccaagctggaagagcgcctgcacaaggtgctggcccaggccggcctgggg
tcgcgccgcgcgctggaacagcgcattgccgatggcctgatcaaggtcaatggcgccgtc
gcgcagaccggcatgtcggtgcgcagcggcgacaagatcgagctcgatggccgcagtttc
gtggccagcgcgctgaccgaaccggcccgcgtgctgatctacaacaagcccgaaggcgaa
gtgaccacgcgcgaagatcccgaaggccgcccgaccgtgttcgagtcgctgccggtattg
aagggttcgcgctggatcgcgatcggccgcctggacatcaacaccaccggcctgctgctg
ctgaccaccgacggtgagctggccaacgcgatgatgcatccctcctacgaggtcgagcgc
gaatacgtggtgcgcgtgcgtgcgccggaaggcgaggacaaggtctccgacgcgatcatc
gagcgcctatcgcgcggcgtgctgctggaagacggcggcgccaagttcgacgagatcgaa
cgcatcggcggcaccgactcgcacgactggttccgcgtggtggtcaaggaaggccgcaac
cgcgaagtgcgccggctgtgggagtcgcagggctgccaggtcagtcgcctcaagcgcagc
cgctacggcaagatctcgctgccgcgcgagctgctgcgtgggcagtcgatcgaagtggcg
caggacaaggtcgatgccctgcgcgccgaactcaagctggaagaaggcgcgccctcggca
ttgacgctgcagccggtgatcggccagcgccgcgccgccaagtccaccgtgcacgtctcg
cgcgatggccgcagcaatgcctacgtcaacggccagacctccggcgccgacgaaggccgt
gagctgcgtcgcttcgacaatctgcgcgaggatcgcggcggccgtggccgtggcaagccg
ggcggtttccgcggcggcctcaccgtcagcggcgaagcggcggccaagcagtcgcagcag
cgcccgttcaagcagcgcgctcccggcaagggcgaccgtgccctgccggacggcaacccg
gccgcgttccgcagctggtacgtgcccgatggcgtcagtaccggccccagcggtcaccgc
aatgccggtcccagtggccccggcaccggccaggcgcgcccgtatgcgaagaagggtccg
ggtggcgcgcgtccaggcggcggcccgggcaatgcacgttccggcgcagctggccagggg
cgtggcggcgccggtggcggacagggccagtcgcagggccaaggccagcgcaagcatccc
tatggtcatccgggcaatgcgccgagctttccgtccgaccacgccaacccgggcttcagc
ccgtatggcgcggcacgtccggcagccggccgcccgagcggcgcacgtgcaggcggcccc
ggtggcaaccgtggtccgggcggcaatcgcggccccggtggtcccggcggcgcgtcgcgt
ggccccggcggtccgggtggtcgtccgccgggtggcggcaatcgtcgcccgccaggcggc
ggtaatcgcggacgctaa
DBGET
integrated database retrieval system
