Xanthomonas sp. CPBF 426: XSP_002311
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Entry
XSP_002311 CDS
T10769
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xaz03009
]
XSP_002311 (dbpA)
Enzymes [BR:
xaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
XSP_002311 (dbpA)
Ribosome biogenesis [BR:
xaz03009
]
Prokaryotic type
rRNA helicases
XSP_002311 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAD1792488
LinkDB
All DBs
Position
1:2671229..2672605
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AA seq
458 aa
AA seq
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MNEFSALPLSPALAPGIDALGYTVLTPIQAQSLPPILQGLDVIAQAPTGSGKTAAFGLGL
LQKLDPAVTRAQALVLCPTRELADQVGKQLRKLATGIPNMKLVVLTGGMPLGPQLASLEA
HDPQVVVGTPGRIQELARKRALHLGGVRTLVLDEADRMLDMGFEEPIREIASRCDKHRQS
LLFSATFPDIIRTLAREILKDPIEITVEGADNAPEIDQQFFEVDPTYRQKAVAGLLLRFN
PESSVVFCNTRKEVDEVAGSLQEFGFSALALHGDMEQRDRDEVLVRFVNRSCNVLVASDV
AARGLDVEDLSAVVNYELPTDTETYRHRIGRTARAGKRGLALSLVASRETGRAQALEAEQ
GQPLTWSRAPLATARPAQLPQAAMTTLRIDGGKTDKLRAGDILGALTGEAGLSGAAIGKI
AIYPTRSYVAIARAHVAKALAHLHAGKIKGRRFRVSKL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattctccgcgctgccgctgtcgccggccctggcccccggcatcgacgccctt
ggctacaccgtcctcactcccatccaggcacagagcctgccgccgatcctgcaggggctg
gacgtcatcgcccaggcgccgaccggcagcggcaagaccgccgccttcgggctgggcctg
ctgcaaaagctcgatccggcagtgacccgtgcgcaggcgctggtgctctgtcccacccgc
gaactggccgaccaggtcggcaagcagctgcgcaagctggccaccggcatccccaacatg
aagctggtggtgctcaccggcggcatgccgctgggcccgcaactggcctcgctggaagcg
catgacccgcaagtggtggtcggcacgcccggccgcatccaagaactggcccgcaagcgc
gccctgcatctgggcggcgtgcgcacgctggtgctggacgaggccgaccgcatgctcgac
atgggcttcgaggaacccatccgcgagatcgccagccgctgcgacaagcaccgccagagc
ctgctgttctcggccaccttcccggacatcatccgcacgctggcgcgcgagatcctgaag
gacccgatcgaaatcaccgtcgaaggcgccgacaacgcgccggaaatcgaccagcagttc
ttcgaggtcgacccgacctaccggcagaaggccgtcgccggcctgctgctgcgcttcaat
cccgaatccagcgtggtgttctgcaatacccgcaaggaagtggacgaagtggccggctcg
ctgcaggagttcggcttttccgcgctcgcgctgcatggcgacatggaacagcgcgaccgt
gacgaagtgctggtgcgcttcgtcaaccgcagctgcaacgtgctggtggccagcgacgtg
gccgcacgcgggctggacgtggaagacctgtcggccgtggtcaactacgagctgcccacc
gataccgagacctaccgccaccgcattggccgtaccgcacgcgccggcaagcgcgggttg
gcgctcagcctggtggcctcgcgcgagaccggccgcgcgcaggcgctggaagccgaacaa
ggccagccgctgacctggtcgcgcgcaccgctggccaccgcccgccccgcgcagctgccg
caggcggccatgaccacgctgcgcatcgatggcggcaagaccgacaagctgcgtgccggc
gacatcctcggcgcactgaccggcgaagccgggctctcgggcgcggcgatcggcaagatc
gccatctaccccacgcgctcctatgtcgccatcgcccgcgcgcacgtcgccaaggcactg
gcgcatctgcatgcgggcaagatcaagggccgccggttccgggtcagcaagctgtaa
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