Xanthomonas sp. CPBF 426: XSP_002522
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Entry
XSP_002522 CDS
T10769
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xaz03016
]
XSP_002522 (truB)
Enzymes [BR:
xaz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
XSP_002522 (truB)
Transfer RNA biogenesis [BR:
xaz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
XSP_002522 (truB)
Prokaryotic type
XSP_002522 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
CAD1793103
LinkDB
All DBs
Position
1:complement(2943901..2944827)
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AA seq
308 aa
AA seq
DB search
MKPRIVYRPLHGILLLDKPAGVSSNTALQSARRLLRAEKGGHTGSLDPLATGLLPLCLGE
ATKIAGLLLGSAKAYDAKVVLGVTTDTDDADGQVLRERAVPALDEDALRAALMPFIGRIR
QQAPIYSALKQGGEPLYAKARRGEAIEAPVREVEVQAIDVIGYAAPRLQLRVTCGSGTYI
RSLARDLGEVLGCGAHIASLRRLWVEPFRTPQMITLEALSAALEAGTDAQDLLLPIEAGL
ADFARIVLDAAHAARFRMGQRLRDAAFPTGQVAVFGPDGTPSGLGLVDAEGRLSPQRLFN
GLNEVASC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccccgcatcgtctatcgcccgttgcacggcatcctgttgctcgacaagccggct
ggagtcagctccaacacggccttgcagtccgcgcgtcgcttgttgcgtgccgaaaagggc
ggccacaccggcagcctggacccgctggccaccggcctgctgccgctgtgtctgggcgag
gcgaccaagattgccggcctcctgctcggttctgccaaggcctacgatgccaaggtcgtg
ctgggtgtcaccaccgataccgacgatgccgatggtcaggtcctgcgcgagcgtgcagtg
cccgcactggacgaagacgcgctgcgtgcagcgctgatgcccttcatcgggcgcatccgc
caacaggcgccgatctattccgcgctcaagcagggcggcgagccgctgtacgccaaggcg
cgccgtggcgaggcaatcgaggcgccggtgcgcgaggtcgaggtgcaggcgatcgacgtg
atcggctacgccgcgccgcggctgcaactgcgcgtgacctgcggatcgggcacctatatc
cgcagcctggcgcgcgatctgggcgaagtgctcggctgcggtgcgcatatcgcctcgctg
cgccggctctgggtcgagccgtttcgcacgccgcagatgatcacgctggaggcgctgtcg
gctgccctggaagcgggcaccgacgcacaggacctgctgctgccgatcgaggccggactg
gccgattttgcgcggatcgtgctcgatgccgcgcacgcggcacgttttcgcatgggccag
cgtctgcgcgatgcggcatttccgaccggccaggtggcggtgttcggacccgacggaacc
ccctccgggctaggcctggtggacgcggaggggcgcttgtcgccgcagcgattgttcaat
ggactgaacgaagtggcgtcttgttaa
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