Xanthomonas sp. CPBF 426: XSP_002575
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Entry
XSP_002575 CDS
T10769
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
xaz Xanthomonas sp. CPBF 426
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xaz03009
]
XSP_002575 (rimO)
Enzymes [BR:
xaz01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
XSP_002575 (rimO)
Ribosome biogenesis [BR:
xaz03009
]
Prokaryotic type
ribosomal protein modification factors
XSP_002575 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
TRAM
PrmA
Motif
Other DBs
NCBI-ProteinID:
CAD1793256
LinkDB
All DBs
Position
1:complement(2999593..3000966)
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AA seq
457 aa
AA seq
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MSQLNPKVGFVSLGCPKALVDSERILTQLRVEGYDIVPSYDAADVVVVNTCGFIDSAVTE
SLDAIGEAMNANGKVIVTGCLGKRPEQIREAYPQVLAVSGPQDYQSVMEAVHAALPPRHD
PFVDLVPDYGIKLTPRHYAYLKISEGCNHRCSFCIIPSMRGDLASRPVDEVLREAERLVR
GGVKELLVVSQDTSAYGVDLKYAERPWRDRMYQTRMKALCEGLSELGVWTRLHYVYPYPH
VDDVIPLMAEGKLLPYLDIPFQHASPRILKLMKRPGAVEKTLERVQRWKAMCPEITVRST
FIVGFPGETDAEFESLLDFLDQAQLDRVGAFAYSPVEGASANALPDQVPEELKQERLARF
MARQAEISAARLEAKIGSVQQCLVDLIEDDIAVARSRADAPEIDGLVHIQNGGERGLKVG
DLVDVEITDSDEHDLFGDALPANVAIQQGRALNLQMV
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagctgaaccccaaagtcggcttcgtcagccttggctgcccgaaggcgctcgtc
gactccgaacgcatcctcacccagctgcgcgtggagggctacgacatcgtgcccagctac
gacgctgccgacgtggtggtggtcaacacctgcggttttatcgattcggcggtgaccgag
tcgctggacgcgatcggcgaggcgatgaacgccaacggcaaggtgatcgtcaccggctgc
ctgggcaagcgcccggagcaaattcgcgaggcctacccgcaggtgctggcagtgtccggc
ccgcaggactaccagagcgtgatggaggcggtgcatgccgcattgccgccgcgccacgac
ccgttcgtggatctggtgcccgactacggcatcaagctgaccccgcgccattacgcgtat
ctcaagatttccgaaggctgcaatcaccgttgcagcttctgcatcatcccgtccatgcgc
ggcgacctggcctcgcgtcctgtggatgaggtcctgcgcgaagccgagcggctggtgcgc
ggcggggtcaaggaattgctggtggtctcgcaggacacctctgcctacggggtggatctg
aagtatgccgagcgcccgtggcgcgaccgcatgtaccagacccgcatgaaggcgctgtgc
gaaggcttgtcggaactgggcgtgtggacgcgcctgcattacgtgtatccgtacccgcac
gtggacgatgtgattccgctgatggccgaaggcaagctgctgccgtatctggacatcccg
ttccaacacgccagcccgcgcatcctcaagctgatgaagcgcccgggcgcggtggaaaaa
accctggagcgcgtgcagcgctggaaggcgatgtgcccggagatcacggtgcgctccacc
ttcatcgtcggcttccccggcgagaccgatgccgagttcgaatccctgctcgacttcctg
gatcaggcccagctggatcgcgtcggtgcgttcgcctattccccggtggaaggcgccagc
gccaacgcgctgccggatcaggtgccggaagagctcaagcaggagcgcctggcgcgcttc
atggcccggcaggcggaaatttctgccgcgcggctggaggcgaagatcggcagcgtgcag
caatgcctggtcgacctgatcgaagacgatatcgcggtggcgcgctcgcgcgcggacgca
ccggagatcgatggcctggtacatatccagaacggcggcgagcgcggcttgaaggtcggc
gatctggtcgatgtggagatcaccgacagcgacgagcacgatctgttcggcgatgcattg
ccggccaatgtcgcaatccagcagggacgcgcgttgaatctgcagatggtgtaa
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