Xanthomonas sp. CPBF 426: XSP_002970
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Entry
XSP_002970 CDS
T10769
Name
(GenBank) type III PLP-dependent enzyme
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz00300
Lysine biosynthesis
xaz00470
D-Amino acid metabolism
xaz01100
Metabolic pathways
xaz01110
Biosynthesis of secondary metabolites
xaz01120
Microbial metabolism in diverse environments
xaz01230
Biosynthesis of amino acids
Module
xaz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XSP_002970
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XSP_002970
Enzymes [BR:
xaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XSP_002970
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
NACHT_N
Motif
Other DBs
NCBI-ProteinID:
CAD1794433
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Position
1:3472402..3473691
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AA seq
429 aa
AA seq
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MSLRIDGDAVMQALPGIRDQSDGPLCAYVYDLGALDAHAAWMRAQLPEACELFYAAKANA
EPPILQTLAPHVDGFEAASGGELAWLHRQQPRAALLFGGPGKLDAELAQAAALPDCTVHV
ESLGELERLAAIAAQAGRCVPVFLRMNIAVPGAQSTRLMMGGQPSPFGLDPDDLDAAMQR
LRASPSLRLEGFHFHLMSHQRDAGAQLHLIAAYLRTVQQWRQRYGLGPLRVNAGGGFGVD
YLAPESSFDWAGFCAGLPGLLREHAQALRLRLEPGRYVSASCGWYLMDVLDLKRSHGAWF
AIARGGTHHFRTPAAQGHDHPFRVLRGAHAPVLRDTPVTLVGQLCTPKDVLARNQHVAAL
APGDCLAFPLAGAYAWNISHQQFLMHPPPQMVFLPVAAQAAATASVEGWTGTRISARNAA
SATASGSSR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcgcatcgatggtgacgcagtgatgcaggcattgccgggcatccgcgaccaa
agcgatggcccgctgtgcgcctacgtctacgacctgggcgctctggatgcgcatgcggcg
tggatgcgcgcgcagctgcccgaagcgtgcgagctgttctacgcggccaaggccaatgca
gagccaccaatcctgcaaacgctcgccccgcacgtggatggcttcgaggcggcctccggc
ggcgaactggcctggctgcatcggcaacagcccagggctgcgttgttgttcggcggcccg
ggcaagctcgatgccgaactggcccaggccgccgcactgcccgactgcaccgtgcatgtg
gaaagcctgggcgaactggaacgcctggccgcgatcgcggcgcaggccggccgctgcgtg
ccggtattcctgcgcatgaacatcgccgtgcccggtgcgcagagcacgcgcctgatgatg
ggcgggcagccctcgccgtttggcctggacccggacgatctggatgcggcgatgcaacgc
ctgcgggccagcccctcgctgcggctggagggcttccatttccacctgatgtcgcaccag
cgcgacgccggcgcgcagctgcatctgatcgccgcctacctgcgcaccgtgcagcagtgg
cggcaacgctatgggctcggcccgttgcgggtgaatgccggcggcggcttcggggtggat
tatctggcgccggaatcgtcgttcgactgggccggcttctgcgccggcctgcctggcttg
ctgcgtgaacacgcccaggcgctgcgcctgcggttggagcccggccgctatgtcagcgcc
agctgcggctggtacctgatggacgtgctggacctcaagcgcagccacggagcatggttt
gcgatcgcccgcggcggcacccatcacttccgcaccccggccgcgcaggggcacgatcac
ccgttccgtgtgctgcgtggcgcgcatgccccggtgctgcgcgacaccccggtcaccctg
gtcgggcagctgtgcacgccgaaggacgtgctggcgcgcaaccagcacgtcgccgcgctg
gcaccgggcgactgcctggccttcccgctggccggcgcatatgcctggaatatttcgcac
cagcagttcctgatgcatccgccgccgcagatggtgttcctgccggtggcggctcaggcg
gcggcaacggcgtcggtcgaaggctggaccggcacgcggatatctgcacgcaacgctgcc
tctgccactgcttccgggtcgtcaaggtag
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