Xanthomonas sp. CPBF 426: XSP_003008
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Entry
XSP_003008 CDS
T10769
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
XSP_003008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
xaz02022
]
XSP_003008
02035 Bacterial motility proteins [BR:
xaz02035
]
XSP_003008
Two-component system [BR:
xaz02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
XSP_003008
Bacterial motility proteins [BR:
xaz02035
]
Pilus system
Twitching motility proteins
XSP_003008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
AAA_22
HTH_30
CR_prot_dom_plant
Motif
Other DBs
NCBI-ProteinID:
CAD1794550
LinkDB
All DBs
Position
1:3522781..3524175
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AA seq
464 aa
AA seq
DB search
MNEPKSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLANNPYDLCLTDMRLPD
GNGIELVTEIAKHYPQTPVAMITAFGSMDLAVEALKAGAFDFVSKPVDISVLRGLVKHAL
ELNNRDRPAPPAPPPEQASRLLGDSSAMESLRATIGKVARSQAPVYIVGESGVGKELVAR
TIHEQGARAAGPFVPVNCGAIPAELMESEFFGHKKGSFTGAHADKPGLFQAAHGGTLFLD
EVAELPLQMQVKLLRAIQEKSVRPVGASSESLVDVRILSATHKNLGDLVSDGRFRHDLYY
RINVIELRVPPLRERGGDLPQLAAAIIARLAHSHGRPIPLLTQSALDALDRYGFPGNVRE
LENILERALALAEDDQISATDLRLPAHGGHRLAATPGSAAVEPREAVVDIDPASAALPSY
IEQLERAAIQKALEENRWNKTKTAAQLGITFRALRYKLKKLGME
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaccgaaaagtgccctggttgtcgatgacgagcgtgacattcgcgaactgctt
gttctcaccctgggccggatgggcctgcgcatcagcaccgccgccaacctggccgaagcg
cgcgagctgctggccaacaatccctacgacctgtgcctgaccgacatgcggttgcccgac
ggcaacggcatcgaactggtcaccgaaatcgccaagcactatccgcagaccccggtggcg
atgatcaccgcgttcggaagcatggacctggcggtggaggccttgaaggccggcgccttc
gacttcgtcagcaagccggtggacatcagcgtgctgcgtggcctggtcaagcacgcactg
gaattgaacaaccgcgaccgccccgctccgccggcgccgccgccggaacaggccagccgc
ctgctcggcgattccagcgcgatggaaagcttgcgcgccaccatcggcaaggtggcgcgt
agccaggcgccggtctacatcgtcggcgaatcgggcgtgggcaaggagctggtcgcccgc
accatccacgaacagggcgcccgcgcggccggtccgttcgtgccggtcaactgcggcgcc
atccccgccgaactgatggaaagcgagttcttcggccacaagaagggcagcttcaccggc
gcgcatgccgacaagcccggcctgttccaggccgcgcatggcggcacgctgttcctggac
gaagtagccgagctgccgctgcagatgcaggtcaagctgctgcgtgcaatccaggaaaaa
tcggtgcgcccggtcggtgcctccagcgagtcgctggtggacgtgcgcatcctctcggcc
acgcacaagaacctgggcgacctggtctccgacggccgtttccgccacgacctgtactac
cgcatcaacgtgatcgaactgcgcgtgccgccgctgcgcgaacgcggcggcgacctgccg
cagctggccgcggcgatcatcgcgcgcctggcgcacagccatggccgcccgataccgcta
ctgacccagtccgcgctcgatgcgctggaccggtacggcttcccgggcaacgtgcgcgag
ctggaaaacatcctcgaacgcgccctggccctggccgaagacgaccagatcagcgccacc
gacctgcgcctgcccgcccacggcggccatcgcctggccgccacccccggcagcgccgcg
gtagaaccgcgcgaagccgtggtcgacatcgaccccgcctcggccgccctgccctcctac
atcgagcaactggaacgcgccgcgatccagaaggcgctggaagaaaaccgctggaacaag
accaagaccgccgcgcagctgggcatcacgtttcgggcgttgcgctacaagttgaagaag
ttggggatggagtag
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