Xanthomonas sp. CPBF 426: XSP_003279
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Entry
XSP_003279 CDS
T10769
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
KO
K02453
general secretion pathway protein D
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz03070
Bacterial secretion system
Brite
Secretion system [BR:
xaz02044
]
Type II secretion system
General secretion pathway protein
XSP_003279 (gspD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Secretin
Secretin_N
type_II_gspD_N0
FTCD_C
Motif
Other DBs
NCBI-ProteinID:
CAD1795344
LinkDB
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Position
1:complement(3863405..3865726)
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AA seq
773 aa
AA seq
DB search
MSERMTQRLFSVSLLIGLLAGCASTPPPEVRRDARLDPQVGAAGATQTSAEQRAEGNASA
KPTPVIRRGSGTMINQSAAAAPSPSLGMASSGSATFNFEGESVQAVVKAILGDMLGQNYV
IAPGVQGTVTLATPNPVSPAQALNLLEMVLGWNNARMVFSGGRYNIVPADQALAGTVAPS
TASPSAARGFEVRVVPLKFISASEMKKVLEPYARPNAIVGTDPSRNVITLGGTRAELENY
LRTVQIFDVDWLSGMSVGVFPIQSGKAEKVSADLEKVFGEQSKTPSAGMFRFMPLENANA
VLVITPQPRYLDQIQQWLDRIDSAGGGVRLFSYELKYIKAKDLADRLSEVFGGRGNNGDS
NASLAPGAETSVLGGQLGNRDSSMGGSSGMTGGSVGESSDGSSSGSSFGGSSGSGSSSGG
LGNGSLQLSPRSNGNGAVTLEVEGDKVGVSAVAETNTLLVRSTPQAWTSIRDVIEKLDVM
PMQVHIEAQVAEVNLTGDLSYGVNWYFENAVNASRDPATALTNATGIGVGAGLTNAAGRN
IWGDIAGSVTSNGLGWTFLGKNAAAIITALDRVTNVRLLQTPSVFVRNNAEATLNVGSRI
AINSTSINTGLGSDSSFSSVQYIDTGVILKVRPRVTKDGMVFLDIVQEVSSPGDRPAACT
SATATVNAAACNVDINTRRVKTEAAVQSGDTIMLAGLIDDTTTDTSDGVPFLSKLPVVGA
LFGTKGKSNTRREVIVLITPSIVRNPQEARNLTDEYGQKFKAMEPLKPSQKPQ
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgcatgacgcagcgcctgttttccgtgtccctgctgatcggcctgctggcc
ggttgcgcctccacgccgccgccggaggtgcgccgcgacgcgcgcctggacccgcaagtc
ggcgctgccggcgctacccagaccagtgccgagcaacgcgccgagggcaatgccagcgcc
aagcccaccccggtgatccggcgtggcagcggcaccatgatcaaccagagcgccgccgcc
gcgccgtcgccctcgctgggcatggccagcagcggcagcgccaccttcaatttcgaaggc
gaatcggtgcaggcggtggtcaaggcgatcctgggcgacatgctcgggcagaactacgtc
atcgcccccggcgtgcagggcaccgtgaccctggccacgcccaatccggtctcgccggcg
caggccttgaacctgctggaaatggtgctgggctggaacaacgcgcgcatggtgttcagc
ggtggccgttacaacatcgtgccggccgaccaggcgttggccggcaccgtcgcgcccagc
accgcatcgccgtctgccgcgcgcggtttcgaagtgcgcgtggtgccgttgaagttcatc
tccgccagcgaaatgaagaaggtgctggagccgtacgcgcgcccgaacgccatcgtcggc
accgatccctcgcgcaacgtgatcacgctggggggcacccgcgccgagctggaaaactac
ctgcgcaccgtgcagatcttcgacgtggactggctgtcgggcatgtcggtgggcgtgttc
ccgatccagtccggcaaggccgaaaaggtttctgcagatctggaaaaggtcttcggcgaa
cagagcaagacgcccagcgccggcatgttccgcttcatgccgctggagaacgccaacgcg
gtgctggtgatcaccccgcaaccgcgctacctggaccagatccagcagtggctggaccgc
atcgacagcgccggcggcggtgtgcggctgttctcgtatgagttgaagtacatcaaggcc
aaggacttggccgaccgcctgtcggaggtgttcggcggccgcggcaacaacggcgactcc
aatgcttcgctggcgccgggcgcggaaaccagcgtgctgggtgggcagctgggcaatcgc
gacagcagcatgggcggcagctcgggcatgaccggcggcagcgttggcgagagtagcgat
ggcagctcctccggcagcagcttcggcggcagcagcggcagtggcagtagtagcggtggg
ctgggcaacggcagcctgcagctgtcgccgcgcagcaacggcaatggcgcggtgacgctg
gaggtggaaggcgacaaggtcggcgtgtcggcggtggccgaaaccaataccttgctggtg
cgttccaccccgcaggcatggacctccatccgcgacgtcatcgaaaagctcgacgtgatg
ccgatgcaggtgcatatcgaggcgcaggtggctgaggtgaatttgacgggcgacctcagc
tacggcgtcaattggtacttcgaaaacgcggtgaatgcttcgagagatccagcgactgca
ttaacgaacgccactggtattggtgttggcgctggccttaccaacgctgcgggtcggaac
atctggggggatattgccggaagcgtgactagtaacggtttgggatggacatttcttgga
aagaatgcggctgccatcatcactgcgttagatcgggtgacaaatgtccgattgctccaa
acgccttcggtgtttgtgcgaaataatgcagaagcgacgctcaacgtcggttcgcgaatt
gcgatcaactcaacttcgatcaatacgggtcttggtagcgacagtagtttctcttctgtg
caatacattgatacgggcgtgattttgaaggtgcgtccgcgtgtgaccaaggacgggatg
gtgtttctggatatcgtccaagaagtaagtagccccggtgatcggcctgccgcgtgtact
tcggcgaccgcaacggtaaacgcagcagcctgtaacgtcgacatcaacacccgccgtgtc
aaaacagaagctgctgtgcaaagcggcgacacgatcatgctggccggtctgattgatgac
acaaccacggatacgagcgatggcgtgcccttcctgagcaagcttcctgtagtcggtgcg
ttgttcggaaccaagggaaagagcaatacccgccgcgaagtcatcgtgctgatcaccccg
tcgatcgtgcgcaacccgcaggaagcgcgcaatctcaccgacgagtacggccagaagttc
aaggccatggagccgctgaagcccagccagaagccgcaatga
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