KEGG   Xanthomonas sp. CPBF 426: XSP_003303
Entry
XSP_003303        CDS       T10769                                 
Name
(GenBank) pectate lyase
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
xaz  Xanthomonas sp. CPBF 426
Pathway
xaz00040  Pentose and glucuronate interconversions
xaz01100  Metabolic pathways
xaz02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:xaz00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    XSP_003303
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    XSP_003303
Enzymes [BR:xaz01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     XSP_003303
SSDB
Motif
Pfam: Pectate_lyase_4
Other DBs
NCBI-ProteinID: CAD1795416
LinkDB
Position
1:complement(3906086..3907219)
AA seq 377 aa
MKPKFSTAAAASLFVGSLLVVGVACADPALEVATTGWATQNGGTKGGSKAAAANIYTVKT
AAELKSALKASVGSNGRIIKISGIIDISEGKPYTTTSDMKSRARLDIPTKTTLIGITSNA
EIREGYFYVKANDVIIRNLTIENPWDPQPVWDPDDGSAGNWNAEYDGLTVEGATNVWVDH
VTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYSAFKSHEKNDLIGSSDSAS
STDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGSTTHPVYKFSHAHGVGKESK
IFSERNVFDISGVSSCDKIAADYGGSVYRDQGSLLNGKALTCSWNSNIGWTPPYTYSLLS
ADKVAADVKAKAGAGKL
NT seq 1134 nt   +upstreamnt  +downstreamnt
atgaagccgaaattttcaacggcggccgccgcgtcgctgtttgtcgggtcgttgctggtt
gttggcgttgcctgcgccgatcctgcactggaagttgcaaccactggttgggcaacacag
aacggagggaccaagggcggttccaaagcggccgcagccaacatctacacggtcaagact
gccgccgagctgaagagcgcgctgaaagccagcgtgggcagcaacgggcgcatcatcaag
atcagcggcatcatcgacatcagcgaaggcaagccgtacaccacgacctcggacatgaag
agccgcgcgcggttggacatccccaccaagaccacgctgatcggcatcaccagcaatgcg
gagatccgcgaaggctatttctacgtcaaggccaacgacgtcatcatccgcaatctcacc
atcgaaaatccgtgggatccgcagccggtctgggacccggatgacggcagcgccggcaac
tggaatgccgagtacgacggcctgacggtcgagggcgcaaccaatgtgtgggtggaccat
gtcaccttcaccgacggtcgtcgtaccgacgatcagaacggcaccgccaacggccgtccc
aagcagcatcacgatggtgcgatggacgttaagaagggcgccaacttcgtcaccatttcc
tattcggcgttcaagtcgcacgagaagaacgacctgatcggttccagcgacagcgcctcc
agcaccgacagcggcaagctcaaggtgaccatccataacaccttgttcgagaacatctct
gcacgcgcaccgcgggtgcgcttcgggcaggtgcatctgtacaacaactaccacgtcggc
agcaccacccatccggtctacaagttctcgcacgcccatggcgtgggcaaggagtcgaag
atcttctccgagcgcaacgtgttcgacatcagtggagtgagcagctgcgacaagattgcg
gccgactacggcggcagcgtctatcgcgatcaaggctcactgctcaacggcaaggcgctg
acgtgctcgtggaacagcaacatcggctggaccccgccgtacacctatagcctgctgtcg
gccgacaaggttgctgcggacgtcaaggcgaaggccggggcgggcaagctgtaa

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