Xanthomonas sp. CPBF 426: XSP_003325
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Entry
XSP_003325 CDS
T10769
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz00521
Streptomycin biosynthesis
xaz00523
Polyketide sugar unit biosynthesis
xaz00525
Acarbose and validamycin biosynthesis
xaz00541
Biosynthesis of various nucleotide sugars
xaz01100
Metabolic pathways
xaz01110
Biosynthesis of secondary metabolites
xaz01250
Biosynthesis of nucleotide sugars
Module
xaz_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
XSP_003325 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
XSP_003325 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
XSP_003325 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
XSP_003325 (rfbB)
00525 Acarbose and validamycin biosynthesis
XSP_003325 (rfbB)
Enzymes [BR:
xaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
XSP_003325 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CAD1795483
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Position
1:complement(3929853..3930908)
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AA seq
351 aa
AA seq
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MATWLVTGGAGFIGGNFVLEAVARGVRVINLDALTYAGNLNTLASLEGNADHVFVKGDIG
DGALVTRLLQEHQPDAVLNFAAESHVDRSIEGPGAFIQTNVVGTLALLEAVRDYWKALPD
ARREAFRFLHVSTDEVYGTLGETGKFTETTPYAPNSPYSASKAASDHLVRAFHHTYGLPV
LTTNCSNNYGPYHFPEKLIPLVIAKALAGEPLPVYGDGKQVRDWLFVSDHCEAIRTVLAK
GKVGETYNVGGNSERQNIEVVQAICALLDQHRPRADGKPRASQITHVTDRPGHDRRYAID
ASKLKNELGWEPAYTFEQGIAQTVAWYLTNQAWVQGVLDGSYRLERIGAAA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtggcgacttggctagtaaccggcggggccggctttatcggcggaaattttgttcttgag
gcagtcgcgcgcggggtccgcgtgatcaatctcgacgcgctcacctatgcggggaacctg
aacacgctggcgtcgctggagggcaatgccgaccatgtcttcgtcaagggcgacatcggc
gacggcgcgctggtgacccggctgctgcaggaacatcaaccggatgcggtgctgaacttc
gctgccgaaagccatgtggatcgctcgatcgaaggccccggcgcgttcatccagaccaac
gtggtcggcaccctggccttgctcgaggccgtgcgcgattactggaaagcgctgccggac
gcgcgccgcgaggcctttcggttcctgcatgtgtccaccgacgaggtctatggcacgctg
ggcgagaccggcaagttcaccgaaaccacgccgtatgcacccaattccccgtattcggca
tccaaggcggcctccgatcacctggtgcgcgcattccaccacacctacgggctgccggtg
ctgaccaccaactgctcgaacaactacggcccctaccatttcccggaaaagctcattccg
ctggtgatcgccaaggcgctggccggcgagccgttgccggtgtacggcgatggcaagcag
gtgcgcgactggttgttcgtcagcgaccactgcgaggcgatccgtaccgtgctggccaag
ggcaaggtcggcgagacctacaacgtgggcggcaactccgagcgccagaacatcgaggtc
gtgcaggcgatctgtgcgctgctggatcagcatcgcccgcgtgcggacggcaagccacgc
gcaagccagatcacccatgtcaccgatcgccccgggcacgaccgtcgctacgcgatcgat
gcctccaagctgaagaacgagctgggctgggagccggcatataccttcgagcagggcatc
gcgcagacggtggcgtggtacctgaccaaccaggcctgggtccagggcgtgctggatggc
agctaccggctcgaacggatcggcgccgcggcctga
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