Xanthomonas sp. CPBF 426: XSP_003669
Help
Entry
XSP_003669 CDS
T10769
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XSP_003669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaz03400
]
XSP_003669
Enzymes [BR:
xaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XSP_003669
DNA repair and recombination proteins [BR:
xaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XSP_003669
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
SH3_16
AAA_19
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
CAD1796499
LinkDB
All DBs
Position
1:4312604..4314826
Genome browser
AA seq
740 aa
AA seq
DB search
MSSTVATLRVALPVPLPQLFDYLPPAEAPLTDPARVGCRVRVPFGPRELVGVVVEIGQLA
SAEGLRAALAWCDDAPLLVDELARSLQWLARYTHAPLGEAQSSALPGPLRRGEPLAETHA
WAWQLTEAGRTGAASLRAGSRPALLAALLLPGALGEEQLDPLLPQWREAARSLAKRDYAA
RVAVPADSIPPRPGSGPQLNDEQQAAADAIRAQRGFATYLLDGVTGSGKTEVYLQAIADC
LAAGRQALVLVPEIGLTPQTLGRFRARLGVPVHALHSGLSDGERARVWAAAWRGEAKLIV
GTRSAVFTPLPNAGLIVIDEEHDGSYKQQDGIRYHARDFALVRGKALDVPVILGSATPSL
ESLHNAYSGRYQHLRLSRRAGEARPPRVRVLDVRKRPLKDGLSPEVLAGIGATLARGEQV
LVFKNRRGYAPVLLCHDCGWTAACQRCSTPLHQTPMTVHAGGRRLQCHHCGARQPAPLAC
PACASLALQPQGIGTERLEERLTEAFPDFPVVRIDRSTTQRRDALETQLARLGSAAGILV
GTQILAKGHDLPRLTMVVVVGIDEGLFSADFRAAEKLSQQLIQVAGRAGRADRPGEVWLQ
THHPEHPLLQTLVNGGYHAFADAELQQRQAAGFPPFAHLALFRAEAKDVAAANQFLLAVR
GLTTADTTTQSPAFAAVECYGPMPAPMPRRAGFQRTQLLLSAQQRSALHRLLDAQLPAIH
ALPQARRVRWSLDVDPIDLY
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgaccgtcgccaccctgcgcgtcgccttgccggtgccgctgccccaactgttc
gactatctgcccccggccgaggccccgctgaccgacccggcgcgagtcggctgccgggtg
cgggtgccgttcgggccacgcgagctggtcggggtggtggtggagatcgggcagttggcc
tccgccgaggggctgcgcgcggcgctggcatggtgcgacgacgctccgctgctggttgac
gagctggcccgttcactgcaatggctggcgcgctatacccacgccccgctgggcgaggcc
cagtccagcgccctgcccggcccgttgcgccgcggcgagccgctggccgagacccatgcc
tgggcctggcaactgaccgaggccgggcgcaccggcgccgccagcctgcgcgccggcagc
cgccccgccttgctggccgccctgctgctgcccggtgcgctgggcgaagaacagctggac
ccgttgctgccgcaatggcgcgaggccgcacgcagcctggccaaacgcgactatgccgcg
cgcgtggcggtgccggccgacagcatcccgccccgccccggcagcggcccgcagctcaac
gacgaacaacaggccgccgccgacgccatccgtgcgcagcgcggttttgccacctatctg
ctcgacggcgtcaccggcagcggcaagaccgaggtctacctgcaggcaatcgccgactgc
ctggcggccggtcgccaggcgctggtgctggtgccggagatcggcctgaccccgcagacg
ctgggccgcttccgcgcccgcctgggcgtgccggtgcacgcgctgcattcggggctgtcc
gatggcgagcgcgcgcgggtgtgggcggcagcctggcgcggcgaagccaagctgatcgtc
ggcacgcgctcggcggtgttcaccccgctgcccaatgccgggctgatcgtgatcgacgaa
gaacacgacggcagctacaagcagcaggacggcattcgctatcacgcccgcgacttcgcg
ctggtgcgcggcaaggcgctggatgtgccggtgatcctgggcagcgccacgccatcactg
gaaagcctgcacaacgcctattccggccgctaccagcatctgcgcctgtcgcgtcgggcc
ggcgaggcgcgtccgccgcgcgtgcgcgtgctcgacgtgcgcaagcgcccgctcaaggac
ggcctgtcgccggaagtgctggccggcattggcgccaccctggcgcgcggcgagcaggtg
ctggtgttcaagaaccgccgcggctatgcgccggtgctgctgtgccacgactgcggctgg
accgccgcctgccagcgctgcagcacgccgctgcaccagaccccgatgaccgtgcacgcc
ggtggccggcgcctgcaatgccaccactgcggcgcgcgccagcccgcaccgctggcctgc
ccggcctgcgccagcctggcgctgcagccgcaaggcatcggcaccgagcggctggaagaa
cgcctgaccgaggcgttcccggactttccggtggtgcgcatcgaccgcagcaccacccag
cgccgcgacgcgctggaaacccagctggcgcgcctgggcagcgccgccggcatcctggtc
ggcacccagatcctggccaagggccacgacctgccacggctgaccatggtggtggtggtc
ggcatcgacgaaggcctgttctcggccgacttccgtgccgccgagaaactctcccagcag
ctgatccaggtggccggacgcgccggacgcgccgaccgtcccggcgaggtctggctgcaa
acccaccaccccgaacatcccttgctgcagaccctggtcaacggcggctaccacgccttt
gccgatgccgaactgcagcagcgccaggctgcgggatttccgccattcgcgcatctggcg
ctgttccgcgccgaagccaaggatgtggcagcggccaaccagttcctgctggcggtgcgt
ggcctgaccacggcggacaccaccacgcagtcgcccgcgtttgccgcagtggaatgctac
ggcccgatgccggcaccgatgccgcgccgcgccggtttccagcgcacccagttgctgttg
tccgcgcaacagcgttcggcgctgcatcgtctgctggacgcgcagctgccggcgatccat
gcgctaccgcaggcgcggcgcgtgcgctggtcgctggatgtggatccgatcgatctgtac
tag
DBGET
integrated database retrieval system
