Xanthomonas sp. CPBF 426: XSP_003766
Help
Entry
XSP_003766 CDS
T10769
Symbol
speA
Name
(GenBank) arginine decarboxylase
KO
K01585
arginine decarboxylase [EC:
4.1.1.19
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz00330
Arginine and proline metabolism
xaz01100
Metabolic pathways
xaz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
XSP_003766 (speA)
Enzymes [BR:
xaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.19 arginine decarboxylase
XSP_003766 (speA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Arg_decarb_HB
Arg_decarbox_C
Motif
Other DBs
NCBI-ProteinID:
CAD1796773
LinkDB
All DBs
Position
1:complement(4427394..4429280)
Genome browser
AA seq
628 aa
AA seq
DB search
MSDWSLDQARKTYSIPHWADGYFDVNDAGHVVVTPTSDGPSVSLPEVVDAARAAGAKLPL
LVRFPDILGQRLGKLQAAFAQAQSEWDYAGGYTAVYPIKVNQHRGVAGTLASHHGDGFGL
EAGSKPELMAVLALSRPGGLIVCNGYKDREYIRLALIGRKLGLQTFIVIEKPSELKLVLE
EARALDVKPGLGVRMRLASLGAGKWQNSGGDKAKFGLSPRQVLDLWKTLRDTEYADSLNL
LHFHMGSQISNVRDIANGMREATRYFVELSRLGARISHVDVGGGLGIDYEGTRSRSYCSI
NYGLHSYASNIVQPLASACEEHGLTPPRIVTECGRAMTAHHAVLIANVSEVEQAPEGRVP
DAHDDEPAAIRHLREIHDELDVRPAVELFQEAQHFHAEGLSAYALGQIDLTHRARIDDLF
YAIAHGVRARLSFDEKSHRPVLDELNERLVDKYFVNFSVFESIPDVWAIDQVFPIVPIER
LNEAPQRRGIIADMTCDSDGMVKTYVENESLDSSMPLHTLNAGESYRIGFFLVGAYQEIL
GDIHNLFGDTDAVEVAVDGDGYRIAQQRRGDTTDVMLDYVGYQLDTLRATYAERIAAAQL
SPERAQELSDALEAGLTGYTYLSDEPLG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattggtccctcgaccaagcccgcaagacctattcgatcccgcattgggccgac
gggtatttcgacgtgaacgatgccggacatgtagtggtcacgccgaccagcgacggcccg
tcggtgtcgttgcccgaggtggtggacgccgcgcgcgcggccggcgccaagctgccgctg
ctggtgcgtttccccgacatcctgggccagcgcctgggcaagctgcaggcggcgttcgcg
caggcgcagtccgaatgggattacgccggcggctacaccgcggtgtacccgatcaaggtc
aaccagcatcgcggcgtggccggcaccctggccagccaccacggtgacggcttcggcctg
gaagcgggcagcaagccggagctgatggcggtgctggcgctgtcgcgtccgggcgggctg
atcgtctgcaacggctacaaggaccgcgaatacatccgcctggcgctgatcggccgcaag
ctcggcctgcagaccttcatcgtcatcgaaaagccctccgagctgaagctggtgctggaa
gaggcgcgcgcgctggacgtcaagccgggcctgggcgtgcgcatgcgcctggcctcgctg
ggcgcgggcaagtggcagaacagcggcggcgacaaggccaagttcgggctgtcgccgcgt
caggtgctggacctgtggaagacgctgcgcgacaccgagtacgccgacagcctgaacctg
ctgcatttccacatgggatcgcagatctccaacgtgcgcgacatcgccaacggcatgcgc
gaggccacgcgctatttcgtggagctgtcgcggctgggcgccaggatcagccacgtggac
gtcggcggcggtctgggtatcgattacgaaggcacgcgctcgcgcagctattgctcgatc
aactacggcctgcattcctacgccagcaacatcgtgcagccgttggccagcgcctgcgaa
gagcacggcctgaccccgccgcgcatcgtcaccgaatgcggccgcgccatgaccgctcac
cacgcggtgctgatcgccaacgtgtccgaagtggagcaggcgccggaaggccgcgtgccc
gacgcgcacgacgacgaaccggcggcgatccgccacctgcgcgagatccacgacgagctc
gatgtgcgcccggcggtggaactgttccaggaggcgcagcatttccacgccgaaggcttg
agtgcgtatgcactgggccagatcgacctgacccaccgcgcgcgcatcgacgacttgttc
tatgcgatcgcgcacggcgtgcgtgcacgcctgagcttcgacgaaaagagccatcgcccg
gtgctggacgaactcaacgagcggctggtggacaagtacttcgtcaacttcagcgtgttc
gagtcgatcccggatgtgtgggcgatcgatcaggtgtttccgatcgtgccgatcgagcgc
ctgaacgaagcgccgcagcggcgcggcatcattgccgacatgacctgcgattccgacggc
atggtcaagacctatgtcgagaacgaaagcctggacagctcgatgccgctgcacacgttg
aatgcaggcgagagctatcgcatcggctttttcctggttggcgcctaccaggaaatcctc
ggcgacatccataacctgttcggcgataccgatgcggtggaagtggccgtggatggcgac
ggctatcgcatcgcgcagcagcgtcgtggcgataccaccgatgtgatgctggactacgtg
gggtatcagctggacacgctgcgtgcgacctatgccgagcgcattgccgccgcgcagcta
tcgcccgagcgcgcgcaggaactgagcgatgcactggaagcagggttgaccggttacacc
tatctgtccgacgaaccgttgggctga
DBGET
integrated database retrieval system