Xanthomonas sp. CPBF 426: XSP_003913
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Entry
XSP_003913 CDS
T10769
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz03030
DNA replication
xaz03410
Base excision repair
xaz03420
Nucleotide excision repair
xaz03440
Homologous recombination
Brite
Enzymes [BR:
xaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
XSP_003913 (polA)
DNA replication proteins [BR:
xaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
XSP_003913 (polA)
DNA repair and recombination proteins [BR:
xaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
XSP_003913 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XSP_003913 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
CAD1797208
LinkDB
All DBs
Position
1:complement(4590274..4593072)
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AA seq
932 aa
AA seq
DB search
MSRLVLIDGSSYLYRAFHALPPLTNAQGEPTGALFGVVNMLRATLKERPAYVAFVVDAPG
KTFRDDLYADYKANRPSMPDDLRAQVQPMCDIVHALGIDILRIDGVEADDVIGTLALQAA
ADGLSVTISTGDKDFAQLVRPGIELVNTMSGSRMDSDAAVIAKFGVRPDQIVDLLALMGD
TVDNVPGVEKCGPKTAAKWLAEYESLDGVIANADRIKGKIGENLRAALPRLPLNRELVTI
KTDVTLASGPRALDLREPNAETLAVLYARYGFTQALRELGGAAAQAGLPTEPMALGAAAS
ARTEPGRARGTGFVSGPVSAPVEVDPALSAPGQYETILTQEQLDGWIARLRAAGQFAFDT
ETDSLDPLRADLIGLSVAAEPGQAAYLPFGHNFPGAPAQLDRAQALAQLAPLLTDPAVRK
LGQHGKYDLHVMRRHGIALAGYSDDTLLESFVLNSGSARHDMDSLAKRYLGYDTVKYEDV
CGKGAKQIPFAQISLEDATRYAAEDADITLRLHQVLGPKLAAEPGLEQVYRDIEMPLVEV
LARIEANGVCVDAAELRRQSADLSKRMLAAQQKATELAGRSFNLDSPKQLQALLFDELKL
PAVVKTPKGQPSTNEEALEAIADQHELPRVILEYRGLTKLRSTYTDKLPEMIHPQSGRVH
TSYHQAGAATGRLSSSDPNLQNIPIRTEDGRRIRRAFVAPAGRKLIACDYSQIELRIMAH
LSGDPGLVGAFESGADVHRATAAEVFGRTIDTVSGDERRAAKAINFGLMYGMSAFGLARQ
LGIGRGEAQDYIALYFSRYPGVRDFMETTRQQARDKGYVETVFGRRLYLDFINAGSQGQR
AGAERAAINAPMQGTAADIIKRAMVSVDGWIADHAQRALMILQVHDELVFEAETDFVDTL
LSEVTARMSAAAELRVPLVVDSGVGDNWDEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgagcagattagtcctgatcgacgggtccagttacctgtaccgcgcgttccacgcgctt
ccgccgctgaccaatgcccagggcgagcccaccggcgccttgttcggcgtggtcaacatg
ctgcgcgccaccctgaaggagcgcccggcctatgtcgcgttcgtggtggatgcaccgggc
aagaccttccgcgatgacttgtatgccgactacaaggccaatcgtccgtcgatgcccgac
gacctgcgcgcgcaggtgcagccgatgtgcgacatcgtgcatgcgctgggcatcgacatc
ctgcgcatcgatggcgtggaagccgacgatgtgatcggcacgctggccctgcaggccgcc
gccgatggcctgagcgtgaccatctccaccggcgacaaggacttcgcccagctggtccgc
ccgggcatcgagctggtcaacaccatgagcggcagccgcatggattcggacgcggcggtg
atcgccaagttcggcgtgcgccccgaccagatcgtcgacctgctggcgctgatgggcgac
accgtggacaacgtgcccggcgtggaaaagtgcggccccaagaccgccgccaaatggctg
gccgaatacgagtcgctcgatggcgtgatcgccaacgccgacaggatcaagggcaagatc
ggcgagaacctgcgtgccgcattgccgcggctgccgctcaaccgtgagctggtcaccatc
aagaccgacgtgacgctggccagtggcccgcgcgcgctggacctgcgcgagcccaacgcc
gagacgctggcggtgctgtacgcccgctacggcttcacccaggcgctgcgcgaactcggc
ggcgccgctgcccaggccggcctgccgaccgagccgatggcgctcggcgccgccgccagc
gcccgcaccgaacccggccgcgcccgcggcaccggcttcgtgtccggcccggtcagcgcc
ccggtggaggtggacccggcactgtcggcacccggccagtacgagaccatcctgacccag
gaacagctcgacggctggatcgcgcgcctgcgcgccgccggccagttcgcttttgatacc
gaaaccgacagcctggatccgctgcgggccgacctgatcggcctgagcgtggccgccgag
cccggccaggcggcgtatctgccgttcggccacaactttcccggtgccccggcccagctc
gaccgcgcccaggcgctggcgcagctggcgccgctgctcaccgaccctgcggtacgcaag
ctcggccagcacggcaagtacgacctgcacgtgatgcgccgccacggcatcgccctggcc
ggctatagcgacgacaccctgctggaaagcttcgtgctcaattccggcagcgcccgccac
gacatggacagcctggccaagcgctacctgggctatgacacggtcaagtacgaggacgtc
tgcggcaagggcgccaagcagatcccgttcgcccagatcagcctggaggacgccacccgc
tacgccgccgaagacgccgacatcaccctgcgcctgcaccaggtgctcggccccaagctg
gccgcagaacccggcctggagcaggtctaccgcgacatcgagatgccgctggtggaggtt
cttgcacgcatcgaggccaacggcgtgtgcgtggacgcggccgaactgcgccgccagagc
gcggacctgtccaagcgcatgctcgccgcccagcagaaagccaccgagctggccgggcgc
agcttcaacctggattcgcccaagcagctgcaggcactgctgttcgacgagctcaagctc
cccgcggtggtcaagacgcccaagggccagccctcgaccaacgaagaggcgctggaggcc
atcgccgaccagcacgagctgccacgggtgatcctggaataccgcggcctgaccaagctg
cgcagcacctacaccgacaagctgccagagatgatccatccgcagtccgggcgcgtgcac
accagctaccaccaggccggtgcggccaccgggcggctgtcctcgtccgatccgaacctg
cagaacatcccgatccgcaccgaggacggccgccgcatccgccgcgcctttgtcgccccg
gccgggcgcaagctgatcgcctgcgactattcgcagatcgagctgcgcatcatggcgcac
ctgtccggcgaccccggcctggtgggcgcgttcgagtccggtgccgacgtgcaccgcgcc
accgccgccgaggtgttcggccgcaccatcgacaccgtcagcggcgacgagcgccgcgcc
gccaaggcgatcaacttcggcctgatgtacggcatgagcgccttcggcctggcccgccag
ctcggcatcggccgaggcgaggcgcaggactacatcgcgctgtacttcagccgttacccg
ggtgtacgcgacttcatggagaccacccgccagcaggcgcgcgacaagggctacgtggag
acggtgttcggccgccggctgtatctggacttcatcaacgccggcagccagggccagcgt
gccggcgccgagcgcgccgccatcaatgcgccgatgcagggcaccgccgccgacatcatc
aagcgcgccatggtcagcgtggacggctggattgccgaccacgcgcagcgcgcgctgatg
atcctgcaggtgcacgacgaactggtgttcgaagccgagaccgatttcgtcgacacgctg
ctgagcgaagtgaccgcgcgtatgtcggctgctgctgaattacgcgtgccgctcgtggtc
gactcgggggttggcgacaactgggatgaggcgcattga
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