Xanthomonas sp. CPBF 426: XSP_003920
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Entry
XSP_003920 CDS
T10769
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz03420
Nucleotide excision repair
xaz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
XSP_003920 (uvrD)
03430 Mismatch repair
XSP_003920 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaz03400
]
XSP_003920 (uvrD)
Enzymes [BR:
xaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
XSP_003920 (uvrD)
DNA repair and recombination proteins [BR:
xaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XSP_003920 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
XSP_003920 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_12
InPase
Motif
Other DBs
NCBI-ProteinID:
CAD1797229
LinkDB
All DBs
Position
1:complement(4599582..4601768)
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AA seq
728 aa
AA seq
DB search
MDVSHLLDHLNPAQREAVSAPPGHYLVLAGAGSGKTRVLIHRIAWLNEVQGVPNHGIFAV
TFTNKAAGEMRHRTDLQLRNGSRGMWIGTFHGLAHRLLRLHWQDARLPEGFQVMDSDDQL
RLVKRVVQALELDEGKYPPKQMSWWINEQKDEGRRPQHIQPEPNDDWTEVRRQVYAAYQE
RCDRSGLLDFAELLLRAHELLRDTPALLAHYRARFREILVDEFQDTNAIQYAFVRVLAGE
TGHVFVVGDDDQAIYGWRGAKVENVQRFLKDFPGAQTVRLEQNYRSSANILGAANAVIAH
NPDRIGKQLWTDSGDGDPIDLYAAYNEVDEARYVVERARQWVRDGGSYGEVAVLYRSNAQ
SRALEEALISEQLPYRVYGGMRFFERAEIKDALAYLRLLTNRSDDAAFERAVNTPTRGIG
DRTLDEVRRLARANALSLWEAAMLCTQENTLAARARNALATFLSLVGQLHAETGDMELAE
RIDHVLMRSGLREHWAKESRSGLDSESRTENLDELVSVASRFTRPDDEDSQGMTELVAFL
AYASLEAGEGQAQAGEEGVQLMTLHSAKGLEFPIVFLVGLEDGLFPSARSLEESGRLEEE
RRLAYVGITRARQKLVLCYAESRRIHGQDNYNVPSRFLREIPRELLHEVRPKVQVSRTAS
LGATRGGPVHGVVEAAPIKLGANVQHPKFGGGVVVDYEGAGGHARVQVQFDDVGAKWLVM
AYANLTVV
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtctctcatttgctcgatcatttaaaccccgcccagcgcgaggccgtttccgcg
ccgccggggcattacctggtgctggccggcgccggctccggcaagacgcgcgtgctgatc
catcgcatcgcctggctcaacgaagtccagggcgtgcccaaccacggcatcttcgcggtg
accttcaccaacaaggctgccggtgaaatgcgccaccgtaccgacctgcagctgcgcaac
ggcagccgcgggatgtggatcggcaccttccatgggctggcgcatcggttgctgcgcctg
cactggcaggacgcgcggctgccggaaggcttccaggtcatggacagcgacgaccagctg
cggctggtcaagcgcgtggtgcaggcgctggagctggacgagggcaagtatccgcccaag
cagatgagctggtggatcaacgagcagaaggacgaaggccgccgtccgcagcatatccag
cccgagcccaacgacgactggaccgaggtgcgccggcaggtgtacgcggcctaccaggag
cgttgcgaccgctccggcctgctggattttgccgagttgctgctgcgcgcgcatgaactg
ctgcgcgacaccccggccttgctggcgcattaccgtgcgcgcttccgcgagatcctggtc
gacgagttccaggacaccaacgccatccagtatgccttcgtgcgcgtgctggccggcgag
accgggcatgtgttcgtggtcggcgacgacgaccaggccatttacggctggcgtggtgcc
aaggtcgagaacgtccagcgcttcctgaaggacttccccggcgcgcagaccgtgcggctg
gagcagaactaccgttccagcgccaatatcctgggcgcggccaatgcggtgatcgcgcac
aacccggaccgcatcggcaagcagctgtggaccgattccggcgacggcgatccgatcgac
ctgtatgcggcctacaacgaggtcgacgaggcgcgctatgtggtcgagcgcgcccggcag
tgggtgcgcgacggcggcagttacggcgaagtggcggtgctgtatcgcagcaacgcgcag
tcgcgcgcgctggaagaagcgctgatttccgagcagctgccgtaccgcgtgtacggcggc
atgcgctttttcgagcgcgccgaaatcaaggatgcattggcgtacctgcgcctgcttacc
aaccgcagcgacgatgccgcgttcgagcgcgcggtcaacacgcccacgcgcggcatcggc
gatcgcacgctggatgaagtgcgccggctggcacgcgccaatgcgttgtcgctgtgggaa
gcggcgatgttgtgcacgcaggaaaacaccctggccgcgcgcgcgcgcaatgcgctggcc
acgttcctgagcctggtcggccagctgcatgccgaaaccggcgacatggaactggccgaa
cgtatcgaccatgtgctgatgcgctcgggcctgcgcgagcactgggccaaggaaagccgc
agcgggctggattcggaatcgcgcaccgagaacctggacgaactggtgtcggtggcctcg
cgcttcacccgcccggacgatgaagacagccagggcatgaccgagctggtggccttcctg
gcctacgcctcgctggaggccggcgaaggccaggcgcaggccggcgaagaaggcgtgcag
ctgatgacgctgcattcggccaagggcctggaattccccatcgtgttcctggtcggcctg
gaagatggcctgttccccagcgcacgctcgctggaagaaagcggccggctggaagaagag
cggcgcctggcctatgtgggcatcacccgtgcgcggcagaagctggtgctgtgctacgcc
gaatcgcggcgcatccacggccaggacaactacaacgtgccctcgcgcttcctgcgcgaa
atcccgcgcgagctgctgcacgaggtacgcccgaaagtgcaggtctcacgcaccgcgtcg
ctgggcgcgacgcgcggcggcccggtacacggcgtggtcgaagccgcaccgatcaagctc
ggtgccaatgtccaacaccccaagttcggcggcggcgtggtcgtggactatgaaggcgcc
ggcgggcatgcacgcgtgcaggtgcagttcgacgacgtcggcgccaagtggctggtgatg
gcctacgcgaatctgacggtggtgtag
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