Xanthomonas sp. CPBF 426: XSP_004088
Help
Entry
XSP_004088 CDS
T10769
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
xaz Xanthomonas sp. CPBF 426
Pathway
xaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
XSP_004088 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xaz03400
]
XSP_004088 (recD)
Enzymes [BR:
xaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
XSP_004088 (recD)
DNA repair and recombination proteins [BR:
xaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
XSP_004088 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
RecD_N
Viral_helicase1
AAA_11
UvrD-helicase
SH3_13
Helicase_RecD
UvrD_C
AAA_22
T2SSE
AAA_16
DEAD
nSTAND3
SLFN-g3_helicase
AAA_28
Rad17
ATPase
Motif
Other DBs
NCBI-ProteinID:
CAD1797715
LinkDB
All DBs
Position
1:complement(4813660..4816074)
Genome browser
AA seq
804 aa
AA seq
DB search
MNQPNLFSALIKADALRPLDLAFAQSLQRLAPDTDPQVLAGAALASLAVTSGHAGLDPAR
AAMLLDAREGPSPALPDPADWQRTLAASRWVDQPAPEDPAAADCPLVLEHGLLYLRRYRE
YERRLALGLQRIAVQSPPPFDAATLAPLFAQLFPNPTPATHPVDPTPLPPGEGARRAGEG
PGLPAPSVHQEGTAPPAPSVYQDGTHPPAPSHHQDRQAQAAALALRRTLLLVTGGPGTGK
TTTIARLLLLRIAQAQASNTPAPRIALAAPTGRAAERMAESLRLAVARAIADGIQLAPTP
AAAAPGQAKPSPHPVASPPHQATEPPHPVASPLHQTTEPANPAVSPLPQAGEGARRAGEG
QPSTWNSLLPTGASTLHRLLGVIPDSPNFRHNADNPLPFDLIVVDEASMVDLPLMCKLVE
AVADGTQLILLGDADQLPSVEAGDVLAAILQAAGPGDTLQPQDAQALQALLGNAPADTTP
AAAHSGGLAGHRVHLLRGYRQAHDFALAPLADAVRAGDADTALALLRSGELAGVHFHEDG
EDPLTLGRDALLAHWRALADAHDPAAALRDAARLRLLTAVRAGPQGARGLNARIEQLLAE
TGSGARRLGSASPWFQGRLLLITENSYRHGLFNGDVGICLRSDASPFSGRSDEGPSSPPG
QSAATANRHAPGTESRAQGPLVAWFEGDGDGQVRGFHPAALPAHESAFAMTVHKAQGSEF
DTVWLQLPTRDARVLSRELLYTGITRARRALHLAGSEAVIRSALARHAARISGLAWRLGA
QQQAAPAKQATEPSTALPVQGALF
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagccaaacctcttcagcgcgctgatcaaggccgacgcgctacgcccgctggat
ctggccttcgcgcaaagcctgcaacgcctggccccggacaccgacccccaggtcctggcc
ggcgccgcgctcgcctcgctggccgttaccagcggccacgcagggctggaccccgcgcgc
gccgccatgctgctggacgcgcgcgagggcccatcgcccgcactgccggaccccgccgac
tggcaacgcaccctggccgcctcgcgctgggtcgaccaaccggctccggaagaccccgcc
gccgccgactgcccgttggtcctggaacacggcctgctctacctgcgccgctaccgcgag
tacgaacgccgcctggcgctgggcctgcaacgcatcgccgtccagtcgccgccgcccttc
gacgccgccacgctggcaccgctgttcgcgcagctattcccaaacccgaccccagccact
catcccgtggacccaacccctctccccccgggagagggtgcccgaagggcgggtgagggt
ccgggcctgcccgcgccatctgtccaccaagagggcacggccccgcccgcgccatccgtc
taccaagacggcacgcacccgccggccccatcccaccaccaggaccgccaggcccaggcc
gccgccctggcgctgcgccgcaccctgctgctggtcaccggcggccccggcaccggcaag
accaccaccatcgcccgcctgctgttgctgcgcatcgcccaggcgcaagcatccaacacc
ccggcaccgcgcatcgccctggccgcgcccaccggccgcgccgccgagcgcatggccgag
agcctgcgcctggccgttgcccgcgccatcgccgacggcatccagctcgcacccactccc
gctgcagccgcgcccgggcaagcgaagccgtcaccgcaccccgtcgcctcccctccccat
caagccacagagccaccgcacccggtcgcttcccctcttcaccaaacgacagagccagca
aaccccgccgtttcccctcttccgcaagcgggagagggtgcccgaagggcgggtgagggc
cagccgtccacctggaactccctcctccccaccggcgccagcaccctccaccgcctgctc
ggtgtcattcccgattccccgaacttccgccataacgcggacaacccgctgccgttcgac
ctgatcgtggtcgacgaagcctccatggtcgacctgccgctgatgtgcaagctggtggaa
gccgtggccgacggcacccagctgatcctgctcggcgatgccgaccagctgccctcggtg
gaagccggcgacgtgctcgccgccatcctccaggccgccggccccggcgacaccctgcag
ccgcaggatgcacaggcgctgcaagcactgctcggcaacgcgcccgccgacaccacgccc
gccgccgcccacagcggcggcctggccggccaccgcgtgcacctgctgcgcggctaccgt
caggcgcacgacttcgcgctcgccccgctggccgacgccgtgcgcgccggcgacgccgac
accgccctggccctgctgcgcagtggcgagctggccggcgtgcatttccacgaagacggc
gaagacccgctcaccctgggccgcgacgcactgctcgcccattggcgcgcgctggccgac
gcgcacgacccggccgccgccctgcgcgatgccgcgcgcctgcgcctgctcaccgccgtg
cgcgccggcccgcagggcgcacgtggcctcaacgcccgcatcgagcaactgttggccgaa
accggttccggcgcccgccgtctcggcagcgcctcgccctggttccagggccgcctgctg
ttgatcaccgaaaacagctaccgccacggcctgttcaacggcgacgtcggcatctgcctg
cgaagcgatgcgagtcccttttcggggcgcagcgacgaaggcccgtcctcaccgccaggc
cagtccgccgccaccgccaaccgccacgccccaggcacagagagccgtgcccagggcccg
ttggtcgcctggttcgaaggcgacggcgacggtcaggtgcgtggcttccaccccgccgca
ctgcccgcgcacgaaagcgccttcgccatgaccgtgcacaaggcccagggcagcgagttc
gacaccgtctggctgcaactgcccacccgcgacgcccgcgtgctcagccgcgaactgctc
tacaccggcatcacccgcgcccgccgcgccctgcacctggccggcagcgaagcggtcatc
cgcagcgcactcgcccggcacgccgcacgcatctcgggcctggcgtggcggttgggtgcg
cagcagcaggcggcacccgccaagcaagcaacagaaccatccactgcgttgcctgtgcag
ggggcgttgttctga
DBGET
integrated database retrieval system
