Ahniella affigens: C7S18_01200
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Entry
C7S18_01200 CDS
T05483
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
xba
Ahniella affigens
Pathway
xba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7S18_01200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xba03019
]
C7S18_01200
Messenger RNA biogenesis [BR:
xba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C7S18_01200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AVP95897
UniProt:
A0A2P1PM43
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All DBs
Position
340988..341554
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AA seq
188 aa
AA seq
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MIDPDGYRPNVGIVLMQGDGRVFWARRVSRDGWQFPQGGIHSDETPLEAMYRELREETGL
GPEHVEVLASTPGWLRYRLPKRYIRRREKPVCLGQKQVWFLLRMVGCDEDVRLDSADKPE
FDTFTWVHFWYPLDNVVDFKREVYDRALTHLSSHARILVELPERATPPQFAEIKRHRGYL
RGGRQLAR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgatcccgacggctaccgacccaatgtgggcattgtgctgatgcagggcgacggc
cgcgtcttttgggcgcgccgggtgtcccgcgatggctggcagttcccacagggcggcata
cattcagacgaaacgccactcgaggccatgtaccgcgagctgcgtgaagaaaccgggctt
ggccccgagcacgtcgaagtattggcttcgacgccgggctggctgcgctatcgcttgccc
aagcgttacatccgccggcgcgaaaagccggtctgtctgggccagaagcaggtctggttc
ctgctccggatggtgggctgcgacgaggacgtgcgcctcgactccgccgacaaacccgaa
ttcgacacgtttacctgggtgcatttctggtatccgctggacaacgtcgtggacttcaaa
cgcgaggtctatgatcgggccctgacgcacctgtcttcgcacgcccggattctggtcgag
ttgccagaacgcgccacaccaccgcagtttgccgaaatcaaacgccaccgcggctatttg
cgcggcgggcggcagttggcgcgctga
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