Ahniella affigens: C7S18_01490
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Entry
C7S18_01490 CDS
T05483
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
xba
Ahniella affigens
Pathway
xba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7S18_01490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xba03019
]
C7S18_01490
03009 Ribosome biogenesis [BR:
xba03009
]
C7S18_01490
Enzymes [BR:
xba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
C7S18_01490
Messenger RNA biogenesis [BR:
xba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C7S18_01490
Ribosome biogenesis [BR:
xba03009
]
Prokaryotic type
rRNA processing factors
C7S18_01490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
AVP95950
UniProt:
A0A2P1PM77
LinkDB
All DBs
Position
complement(423306..426638)
Genome browser
AA seq
1110 aa
AA seq
DB search
MLINATQREELRVAIVDGQNLFDLDIEIPSKEQKKSNIYKGRITRVEPSLEACFVDYGAE
RHGFLPLKEIGREYFQPGVDPHRAGIRELIKEGTEIIVQVDKEERGNKGAALTSFISLAG
RYLVLMPNNPRAGGVSRRIEGDDRQNLKEVMDDLKLPDEMGLIIRTAGMGREAEELQWDL
DYLLLVWKSIIDASTNRKAPFLIYQESKLIIRALRDYLRNDIGEILVDEESLYDDAREFM
AQVMPQNLRKLKLYKETVPLFSRFQIETQIENAFERSVRLPSGGSIVIDQTEALTAIDIN
SSRATKGGDIEETALNTNLEAAVEIARQLRIRDMGGLIVIDFIDMDSPKHQREVEERLRD
ALRMDRARVQLGKISRFGLLEMSRQRLRPSLGEATAQVCPRCEGHGRIRSVESLSLSILR
IAEEEAMKENTGQVLVQCPPMVANFLLNEKRRAIIEIEQRQESGVIIVADDKLETPHYEV
RRIRQSEVGMETAPSYERVTPLVPMPMPASTQPVVEGEKPAVTRIAPAAPAPVKEDADAT
PTPTPAPVAAKPAPQAPAAAAVAAAPAASGGFVAWLKRLFGMGETPAAAPAPAAPAKPEQ
KPNKDRRDDRRDRQDRQHRRDDRQQGQKQRDGKDRDNRDRDRDNQAGGKNNQQAQGGPKQ
GQQNQAQGKNAGQGQNPGQAGGNKPQQPAQGGGKQPGNQQHRGQQPAAQPVAPAAKAAAP
ATPAAEPKPTSAAATADEPKPVVAETAANADAQTAPNGDTPAIGNGEGKRRRGRRGGRRR
RRERGEGQNAAAGTAGGNELDLDDEDGDLPDDGSDALSTDEAVATAEAVRAPKARSEAAV
SRPRNRHEAITAEVPAVVAAVAATPAAVGSTEQSSPEVAAEPAPAPESSTAPEAAPAPEA
APAPEAAPAPEAAPAPEATPAPEATPAPEAAPAPEAAPAPEAAPALEAAPAPESAPAPAA
APESPTASDATAVSSAAVVTTESAPAAAPTAPLAPATAAATAAPSEVSVVTSDAAAIEPA
VPADAAPVATASAIEETVVVAVEPTPAVDEPSRIEPVATPPAASAPVASDVASATADTVA
DSEPTAPAAAIADASAAVAESSDAERPTTG
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcaacgcaactcagcgggaagagttgcgcgtggccattgtcgacggccagaac
ctctttgatcttgatattgagatcccatccaaagagcagaagaagtcgaacatctacaaa
ggccggatcactcgggtcgaacccagtctcgaagcctgcttcgtcgattacggtgccgag
cgtcacggctttctgccactgaaggaaatcggtcgcgagtattttcagccgggcgtcgac
ccacaccgtgccggcatccgcgaactgatcaaggaagggaccgagatcatcgtccaggtc
gacaaggaagaacgcggcaataagggcgcggcgctgacctcgttcatcagcctggccggt
cggtacctggtgctgatgcccaacaacccgcgcgcgggtggcgtgtcgcggcgcatcgag
ggcgatgaccgccagaatctcaaagaggtcatggacgacctcaagttgccagacgaaatg
ggtttgatcatccgcaccgccggcatgggtcgcgaagccgaagagctgcagtgggacttg
gactacctgctgctggtctggaaatcgattatcgatgcctcgaccaatcgcaaggcaccg
ttcctgatttaccaggaatccaagctgatcatccgcgcactgcgcgattatctgcgcaac
gacattggcgaaatcctggtcgacgaggaaagcctgtacgacgatgcccgcgagttcatg
gcgcaagtcatgccgcagaacttgcgtaagctgaagctctacaaggaaaccgtcccgctg
ttttcgcggttccagatcgaaacgcagatcgagaacgcgtttgagcgctcggtgcgcctg
ccttccggtggctcgatcgtcatcgaccagaccgaagcgctgaccgcgatcgacatcaac
tcgtcgcgcgccacgaagggtggcgatatcgaggaaaccgcgctcaacacgaatctcgaa
gccgccgtggagatcgcccgccagttgcgcatccgcgacatgggcggcctgatcgtcatc
gactttatcgacatggattcgccgaagcaccagcgcgaagtcgaggaacggctgcgcgat
gcgctgcggatggaccgagcgcgcgtgcaactcggcaagatctcgcgctttggcttgctc
gaaatgtcgcgtcagcgcctgcgtccgtcgctcggcgaggctaccgcccaggtctgcccg
cgctgcgaaggccacggacgcatccgctcggtcgaatcgttgtcgctgtcgatcctgcgt
attgccgaagaagaggcgatgaaggagaacaccggacaagtgctggtgcagtgcccgccg
atggtcgcgaacttcctgctgaacgagaagcgccgcgcgatcatcgagatcgagcagcgc
caggaatctggcgtgattattgttgccgacgacaagctggaaacaccgcattacgaagtc
cgccgcattcgccagagcgaagttggcatggagacggcaccgagttacgagcgcgtcacc
ccgctggtaccaatgccgatgccggcctctacgcagccggtcgtcgaaggcgaaaaacca
gccgtgacccgaatcgcaccggcggcgcccgctccagtcaaagaagatgctgacgccacg
cccacgccaacgcctgcgccagttgctgcgaaaccggcaccgcaagcgccagccgcggca
gccgtggcagccgcaccggcagcgagcggcgggtttgtcgcctggctgaagcgcctgttt
ggcatgggcgagacgccggccgcggcccccgcgcctgccgcgccggccaaacccgagcag
aaaccaaacaaagatcgccgtgacgaccgccgcgatcgccaagatcgccagcaccgtcgt
gacgaccgtcagcaaggccaaaagcagcgcgacggcaaggaccgcgacaatcgggatcgt
gatcgcgacaaccaagcgggcggcaagaacaatcagcaggcccagggtggaccgaaacaa
ggccagcagaatcaggcgcagggcaagaatgcgggccagggtcagaacccaggtcaggcc
ggcggtaacaagccccagcaaccggcgcagggcggtggcaagcaaccggggaatcagcag
catcgaggccagcagcccgcagcccaacccgttgcgccagccgccaaggctgccgccccg
gcgacacctgcagccgagccgaaaccaaccagcgccgcagcgactgccgatgaaccaaag
ccagtcgttgcagaaaccgcggcaaatgccgacgcccaaaccgcgccgaacggcgatacg
ccagccatcggcaatggcgagggcaagcgtcgtcgcggccgccgtggtggtcgccgtcgc
cgtcgcgaacgcggcgaaggccaaaacgcggccgccggtactgcgggcggcaacgaactt
gacctcgatgacgaagatggcgatttgccagatgacggttccgacgctctgagcaccgac
gaggctgtcgccaccgctgaggcggtcagggcaccaaaggcacggagcgaggccgcggtc
agccgcccgcgcaaccgtcatgaggcgattacagcggaagtcccagccgtagtggccgcc
gtggccgcaacgccggctgcggtgggttcgaccgagcaatcgagtcctgaagtcgctgca
gagccagcaccggcaccagaatcttccacggctcctgaggcagctccggctcctgaggca
gctccggctccagaggcagctccggctccagaggcagctccggctccagaggcaactccg
gctccagaggcaactccggctcctgaagcagctccggctcctgaagcagctccggctcct
gaggcagctccggctcttgaggcagcaccggcccctgaatcggcaccggctccggcagcg
gcacccgagtcgccgacggcatctgacgcaacggccgtttctagcgccgcggtggtgacg
actgaatcggcgccagcagctgcgccaacggcgccgctggcgccggctacggctgcagca
accgctgctccgagtgaggtttccgttgtcacaagtgacgcggcagccattgagcccgcc
gtcccggcggacgcagcgcccgtcgcaaccgcatccgccatcgaagaaactgttgtcgtc
gctgttgaaccgacgccagctgttgacgaaccgtcccgcatcgaaccggtcgcaacgccg
cccgcggcaagcgcgcccgtcgccagtgatgtcgccagtgcaacggccgacaccgtcgcc
gattcggagccgaccgctccggcggctgcaatcgctgacgcgtcggctgcggtagccgaa
tcgtcggacgccgagcgcccgaccaccggctga
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