Ahniella affigens: C7S18_03625
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Entry
C7S18_03625 CDS
T05483
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xba
Ahniella affigens
Pathway
xba03030
DNA replication
xba03430
Mismatch repair
xba03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7S18_03625
03430 Mismatch repair
C7S18_03625
03440 Homologous recombination
C7S18_03625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xba03032
]
C7S18_03625
03400 DNA repair and recombination proteins [BR:
xba03400
]
C7S18_03625
Enzymes [BR:
xba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7S18_03625
DNA replication proteins [BR:
xba03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7S18_03625
DNA repair and recombination proteins [BR:
xba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7S18_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HHH_3
PEX11
Motif
Other DBs
NCBI-ProteinID:
AVP96333
UniProt:
A0A2P1PNA4
LinkDB
All DBs
Position
complement(974359..977862)
Genome browser
AA seq
1167 aa
AA seq
DB search
MTRPFVHLNVHSEYSLIDSTIRVDDLARACATANMPAVALTDDSNFFALVKFYGACESAG
IKPLVGCDFWVADGTEQSRVSVLAQNRAGYLRLSRVLSDAYRSRGKNDRVLVPRDRLLAE
AEDVFVLLGERSDVARAADLDRASQLLSEWQRAFDDRLYVQVARLNRGATEESSNQRLLH
LASRYDLPAVASNEVRFTGRDDFEAHEARVCIATSRVLNDPKRPREYTPEQYLKSPAEMA
ERFADLPVLVDNAVELAKRCNVELSFGKYYLPAYPVPKTHTLETFIRERAEVGLGKRLQI
QPPSGDYAEPDYHERLKIELDVIVKMGFEGYFLIVADFINWAKDNGIPVGPGRGSGAGSL
VAYALGITDIDPLPLDLLFERFLNPERVSMPDFDIDFCMEGRDQVIDYVGQKYGRDKVCQ
IITYGTMAAKAVVRDTGRVLGMSYGHVDSIAKLIPNTLGITLEGAIKESPELAARIEAED
DCATLIELAMKLEDLTRNAGKHAGGVVIAPSALTDFAPLYCVDESDGVVTQFDKDDVEKA
GLVKFDFLGLRTLTIIDWAVKAINENRRRKGEPPIDINKIPAGDEKTYTLLKSGQTTAVF
QLESRGMKELIRKLQPDNFEDIVALVALFRPGPLQSGMVEDFIARKHGKAEVSYPHASLE
AILKPTYGVIVYQEQVMQIAQVLAGYTLGGADLLRRAMGKKKPEEMAQQRAIFEAGAKNN
GVDPDRARGIFDLMEKFAEYGFNKSHSAAYAMVTYQTGWLKAHYPAEFMAAVCSSDMDNQ
DKLVNFLDDARAYPLNVLPPDVNESEFMFKAMSPSEIRYGLGGIKGVGQQVCEMIVEARR
KTGRFTDLADLCRRIDSQKLNKRVLEALIYSGAMDSFGQTRASLMNYLPEAVKAAEQHLR
NLEAGQHDMFGQSAATPTAPPIELLPEWPLIRVLNGERETLGHFLSGHPADAYKDWLKQL
TTCSIGHVEQAWRSGQSQTERSRGRLELPIVLGGMVPAGLRRRGESMAFAALEDASGRIE
VALYRDTLNDFGGLLSKDELVVIEGGLSPDDFSGGFQLKAKRIYTLAQALERFARGIKVK
LNGVDLQFPNQLAAALKPHAGGTTPVRLTYARNGIYTELNLGQAWRVRLLPELIDKLRAL
PGVHELDVVLSRASSGGNSQSASSAGN
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtccctttgttcacctgaacgtgcacagcgagtactcgctgatcgactcgacg
attcgggttgacgatctggcacgcgcgtgcgcgactgccaatatgccggcggtggccttg
acggacgattccaattttttcgcattggtgaagttttacggcgcctgcgagagcgcgggc
atcaagccgctggttggttgcgatttctgggtggccgatggcacggagcaaagccgcgtt
tcggtgctggcccaaaatcgcgccggctatctgcgcctgtcacgcgtgctctcggacgcc
tatcggagccgcggcaagaatgaccgcgtgctcgtgccgcgcgaccgcctgctggccgaa
gccgaagacgtcttcgtgctgctcggtgaacgctccgacgtcgcccgggcggccgatctc
gaccgcgccagccagttgctgtccgaatggcagcgcgcattcgacgatcgtctgtatgtg
caagtggcgcggctcaatcgtggcgccaccgaagaatcgagcaatcagcgcctgttgcat
ttggcgagtcggtacgatctcccagcggtcgccagcaacgaagtgcgattcacgggccgt
gatgatttcgaggcgcacgaagcccgagtgtgcattgccacgagccgggtcctgaacgac
cccaaacgcccgcgcgagtacacgccggagcagtatctgaagtcacctgcggaaatggcg
gagcgctttgccgacttgcccgtcttggtcgacaacgccgtcgaactggccaagcgctgc
aatgtcgagctctcgttcggcaagtactacctgcccgcgtatcccgtacccaagacgcac
acgctggagaccttcattcgcgagcgcgccgaagtgggtctcggcaagcgcctccagatt
cagccacccagcggcgattatgcggaaccggattaccacgagcgcctgaagatcgaactc
gacgtcatcgtgaagatgggctttgaaggctacttcctgatcgtcgccgacttcatcaat
tgggcaaaggacaatggcattcccgtcggtcccggccgtggttcgggcgccggctcgctc
gttgcgtatgcgctcggcatcaccgacatcgacccgctgccgctggacttgctgttcgag
cgcttcctgaacccagaacgcgtatcgatgcccgacttcgatattgacttctgtatggaa
ggccgcgatcaggtcattgactacgtcggccagaagtatggtcgcgacaaggtctgccag
atcatcacgtacggcacgatggcggcgaaggccgtggtccgggatacgggccgcgtgctc
ggcatgagttacgggcatgtcgattcgatcgccaagttgattccgaacaccctcggcatc
acgcttgagggcgcgatcaaggaatcgcccgagctcgccgcgcgtatcgaagccgaggac
gattgcgccacgctgatcgaactcgcgatgaagctcgaagacttgacccgcaacgccggc
aaacatgccggtggcgtggtgattgcgcctagcgctttgacggatttcgcgccgctttac
tgcgtcgatgaatcggacggcgtcgtcacgcaattcgacaaggacgacgtcgaaaaggcg
ggcctcgtcaagttcgactttcttggcctgcgcacgctgacaatcatcgactgggcggtc
aaggccatcaatgagaatcgccgacgcaaaggcgagccgccaatcgacatcaacaagatt
ccggcaggcgatgagaagacctacacgttgttgaaaagcggtcagaccaccgcggtgttc
cagctcgaatcccgcggcatgaaggagctgatccgaaagctccagccggacaacttcgag
gacatcgtcgccctggtggcgctgttccggcctggcccgctgcaatcgggcatggtcgaa
gacttcattgcgcgcaagcacggtaaggccgaagtcagctacccgcatgcgtcgctcgaa
gcgatcctgaaaccgacctacggcgtcatcgtctatcaggaacaggtgatgcagattgcg
caggtgctggccggctacacgctcggcggtgccgaccttctgcgccgcgcgatgggcaag
aagaagcccgaagaaatggcgcagcagcgcgcgatcttcgaggccggcgcgaagaacaac
ggcgtcgacccagatcgtgcgcgcggcatcttcgacctgatggaaaagtttgcggagtac
ggcttcaacaagtcgcattcggccgcttacgccatggtgacgtatcagaccggttggctg
aaagcgcactatcccgctgaattcatggcggcagtctgctcgtccgacatggacaaccag
gacaagctcgtcaatttcttagacgatgcgcgcgcgtatccgctcaacgtgctgccgcct
gatgtgaacgaatccgaattcatgttcaaggcgatgagcccatcggagattcgctacgga
ctcggcggcatcaagggtgtgggccagcaagtctgcgagatgatcgtcgaagcgcggcgc
aagacgggccgcttcacggatctcgccgatttgtgtcgccgaatcgattcgcagaagctc
aacaagcgggtgttggaagcgttgatctattcaggcgcgatggattcgttcgggcagacg
cgcgcgagcctgatgaactacctgcctgaggccgtcaaagcagccgagcaacatttgcgg
aatctggaagccggccagcacgacatgttcggccaaagtgccgcaacgccgacggcgcca
ccgatcgaactactccccgagtggccgttgatccgcgtgctgaatggcgagcgcgaaacg
ctcggccacttcctcagtggccacccagccgacgcatacaaggattggctgaagcagctg
accacctgcagcattggccatgtcgagcaggcgtggcgcagtggccaaagccagaccgag
cgcagccgtggtcggctggagttgcccatcgtgctcggcggcatggtgccggccgggctt
cgtcgtcgcggtgagtcgatggcctttgcggcactcgaagacgcctcgggacgcatcgaa
gtggcgttgtatcgcgacacgctgaacgactttggcggcctgctgtcaaaggacgaactg
gtggtcattgaaggcggtttgtcgccggatgatttcagcggtggctttcagctgaaagcc
aagcgcatttatacgctcgcacaagcactggagcgcttcgctcgcggcatcaaggtcaag
ctcaatggcgtcgacctgcagtttccgaaccaattggccgctgcgctgaagccccatgcc
ggcggcaccacgcctgtgcgcctgacctacgcgcggaacggcatctacaccgaactcaac
ctcggccaagcgtggcgcgttcggctgcttccggagttgatcgacaagctccgggcgcta
ccgggtgtgcatgaacttgatgtggtgttgagtcgcgccagtagcggcgggaacagccag
agtgcgtcgtcggccggcaattga
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integrated database retrieval system
