Ahniella affigens: C7S18_04820
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Entry
C7S18_04820 CDS
T05483
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
xba
Ahniella affigens
Pathway
xba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C7S18_04820 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xba03019
]
C7S18_04820 (recQ)
03400 DNA repair and recombination proteins [BR:
xba03400
]
C7S18_04820 (recQ)
Enzymes [BR:
xba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7S18_04820 (recQ)
Messenger RNA biogenesis [BR:
xba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C7S18_04820 (recQ)
DNA repair and recombination proteins [BR:
xba03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C7S18_04820 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
AVP96564
UniProt:
A0A2P1PNZ2
LinkDB
All DBs
Position
complement(1293271..1295106)
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AA seq
611 aa
AA seq
DB search
MTLAAPGLAPTLDDARNLLQRTFGYRDFRGPQAGIIEHLLEGGDALVLMPTGGGKSVCYQ
IPAVLRAGLGVVISPLIALMQDQVEALHEIGIEAAFLNSSLSATEAARVYERLEAGQLQL
LYVAPERLLMAGTLDLLSRLPISLFAIDEAHCVSQWGHDFRKEYRALGVLHERWPNVPRV
ALTATADLRTRGEIIEQLELGQAQVFLSSFDRPNLCYRVQAKTEARRQLLEFLAERRGQA
GIIYCQSRKKVDELAGKLLELGWPALPYHAGLDDATRARHQRRFLTEDGCIMVATIAFGM
GIDKPDVRFVVHTELPKSIEAYYQETGRAGRDGQPADAMMLFGYGDLVLPRRFIEESEAS
ESRKQFERQRLNVLVEYCESVACRRINLLAAFDEAYPGNCGKCDNCLEPPARLDGRQAAK
KFLSAAYRTDQRYGMNYLIDVLRGERTERILAQGHDQQSTFGIGQELNPAQWQSVARQLI
AQGLLDVDPQYGSIRLNEASRAVLRGGPVWLRQLETGGRRPKKPKKFNGEHHESTTRDDA
LVSAIKAWRQARAKAQNLPAYVILHDATIQAIAARLPESLDELAEVHGLGQAKISRYGTE
LIDLVRQFAET
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
gtgactctcgcagcccctggccttgcgcccaccctcgacgatgcccgcaacttgttgcag
cggacatttggctatcgggatttccgcggccctcaagccggcatcatcgagcacctgctc
gaaggcggcgatgcgctcgtgctgatgccgactggcggtggcaagtccgtttgctaccag
atcccggccgtcttgcgcgcgggcttaggtgtggtgatctcgccgctgatcgcgttgatg
caggatcaagtcgaggcgttgcacgagatcggcatcgaggcagcatttttgaactccagt
ctgagcgcgaccgaagcggcccgagtctatgaacgtctcgaagcgggtcagctgcagttg
ctctacgttgcgccagagcgattgttgatggctggcacgcttgacttgctttcgcgcctg
ccgatcagcctgtttgcaatcgatgaagcccactgcgtctcgcaatggggtcacgatttc
cgaaaagaatatcgtgctctcggcgtcctccatgagcgctggccgaacgtgccacgcgtg
gccttgaccgccacggccgacttgcggacccgcggcgagatcattgaacaactcgaactc
gggcaagcccaagtatttctgagctcgttcgatcgccccaacctctgctatcgcgtccag
gccaaaacggaagcgcgccgtcagttgttggagttcctcgccgaacgccgcggtcaggca
ggcatcatttattgccagtcgcgcaagaaggtcgatgaacttgccggaaagctgctcgaa
ctgggctggccggcgctgccctatcacgccggtttggacgatgcgacgcgcgcgcgccat
cagcgtcgttttctgactgaagatggctgcatcatggtcgccacgattgcatttggtatg
ggcatcgacaaaccggacgtgcggttcgtcgtgcacaccgaactacctaagtcgattgag
gcctattatcaggagacgggtcgtgcgggccgcgatggtcaacctgctgatgccatgatg
ttgtttggctatggcgatttggtgttacctagacgcttcattgaggaatccgaggcgagc
gagtcgcgcaagcaatttgaacggcagcgcttgaatgtcctggtcgagtactgcgaatcc
gtcgcatgccggcgaatcaatctgcttgccgcattcgacgaagcgtatcccggcaactgt
ggaaaatgcgacaactgcttagagccacccgcacgtttggacggtcgccaggcagcgaag
aagttcttgagtgcggcgtatcggaccgaccaacgctacggcatgaattacctgatcgac
gtgctacgcggtgagcgcaccgagcgaattctcgcgcaggggcatgatcaacagtcgacg
tttgggattggccaggaactcaaccccgcgcaatggcaatcagtcgcgcgccagttgatc
gcacaagggttgcttgatgtggacccgcaatacggctcgattcggctgaacgaggccagt
cgcgcagtgctgcgcggcggcccagtttggctgcggcaactggaaacaggtggtcgtcgc
cccaagaagccgaagaagttcaacggcgaacatcacgagtccacaacgcgtgatgatgca
ctcgtcagcgccatcaaagcctggcgtcaggcgcgcgccaaggcgcagaatctgccggcc
tatgtgatcctgcacgacgccacgattcaggccattgccgcaagattgccggagtcgctc
gacgaactcgccgaggttcatggcttggggcaagccaagatcagtcgctatgggacggaa
ttaattgacttggtgcgccagttcgccgagacctga
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